RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 RGS8P57771 180 aaPredicted RBP1.64□□□□□ -2.15
SMC4-207ENST00000467263 BIKQ13323 160 aa1.64□□□□□ -2.15
SMC4-207ENST00000467263 TRMT5Q32P41 509 aaKnown RBP1.64□□□□□ -2.15
SMC4-207ENST00000467263 C6orf99Q4VX62 202 aa1.64□□□□□ -2.15
SMC4-207ENST00000467263 CARD17Q5XLA6 110 aa1.64□□□□□ -2.15
SMC4-207ENST00000467263 SLC25A29Q8N8R3 303 aa1.64□□□□□ -2.15
SMC4-207ENST00000467263 OR52N1Q8NH53 320 aa1.64□□□□□ -2.15
SMC4-207ENST00000467263 PHOSPHO2Q8TCD6 241 aa1.64□□□□□ -2.15
SMC4-207ENST00000467263 S100PBPQ96BU1 408 aa1.64□□□□□ -2.15
SMC4-207ENST00000467263 C8orf44Q96CB5 159 aa1.64□□□□□ -2.15
SMC4-207ENST00000467263 TGS1Q96RS0 853 aaKnown RBP1.64□□□□□ -2.15
SMC4-207ENST00000467263 TMEM185BQ9H7F4 350 aa1.64□□□□□ -2.15
SMC4-207ENST00000467263 TRIM45Q9H8W5 580 aaPredicted RBP1.64□□□□□ -2.15
SMC4-207ENST00000467263 ASF1BQ9NVP2 202 aa1.64□□□□□ -2.15
SMC4-207ENST00000467263 SYNJ2BP-COX16A0A087WUM0 186 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 A0A0A6YYD5 115 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 CCL15-CCL14A0A0B4J2E2 113 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 FSTL3O95633 263 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 OXTP01178 125 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 TRBV12-3P01733 135 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 MAS1P04201 325 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 TGM4P49221 684 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 C21orf59P57076 290 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 CCL15Q16663 113 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 APOBEC3HQ6NTF7 200 aaKnown RBP1.63□□□□□ -2.15
SMC4-207ENST00000467263 BBS7Q8IWZ6 715 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 OR4C5Q8NGB2 326 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 OR4M2Q8NGB6 313 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 OR56A4Q8NGH8 313 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 FAM81AQ8TBF8 368 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 NRGNQ92686 78 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 RAB1CQ92928 201 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 TMEM159Q96B96 161 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 PLIN2Q99541 437 aa1.63□□□□□ -2.15
SMC4-207ENST00000467263 CAB39Q9Y376 341 aaPredicted RBP1.63□□□□□ -2.15
SMC4-207ENST00000467263 TEX46H3BTG2 121 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 IGKV1-39P01597 117 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 IGKV1D-39P04432 117 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 MMP7P09237 267 aaPredicted RBP1.62□□□□□ -2.15
SMC4-207ENST00000467263 ACOT2P49753 483 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 GZMMP51124 257 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 PPP1CAP62136 330 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 SLC9A3R2Q15599 337 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 ZNF678Q5SXM1 525 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 MFSD14CQ5VZR4 134 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 TMEM236Q5W0B7 351 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 ZFAND6Q6FIF0 208 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 ZYG11AQ6WRX3 759 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 CENPQQ7L2Z9 268 aaPredicted RBP1.62□□□□□ -2.15
SMC4-207ENST00000467263 SCD5Q86SK9 330 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 VKORC1L1Q8N0U8 176 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 GSDMAQ96QA5 445 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 TEAD3Q99594 435 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 PDCD1LG2Q9BQ51 273 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 CCDC77Q9BR77 488 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 EMC6Q9BV81 110 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 CALN1Q9BXU9 219 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 FAM192AQ9GZU8 254 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 DUSP21Q9H596 190 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 ZNF302Q9NR11 478 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 CA10Q9NS85 328 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 HMGXB4Q9UGU5 601 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 SAMHD1Q9Y3Z3 626 aaKnown RBP1.62□□□□□ -2.15
SMC4-207ENST00000467263 MUC6Q6W4X9 2439 aa1.62□□□□□ -2.15
SMC4-207ENST00000467263 LOC102724200A0A096LPH7 203 aaPredicted RBP1.61□□□□□ -2.15
SMC4-207ENST00000467263 IGKV1-6A0A0C4DH72 117 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 KRT14P02533 472 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 STOMP27105 288 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 HMOX2P30519 316 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 MPIP34949 423 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 NBL1P41271 181 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 RPS15P62841 145 aaKnown RBP1.61□□□□□ -2.15
SMC4-207ENST00000467263 HMGN5P82970 282 aaKnown RBP1.61□□□□□ -2.15
SMC4-207ENST00000467263 CCDC183Q5T5S1 534 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 KDM4DQ6B0I6 523 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 JAGN1Q8N5M9 183 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 LRRC75AQ8NAA5 344 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 OR51F2Q8NH61 342 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 STACQ99469 402 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 SFXN3Q9BWM7 321 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 MS4A8Q9BY19 250 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 DSN1Q9H410 356 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 CCNB1IP1Q9NPC3 277 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 GCNT4Q9P109 453 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 RAB22AQ9UL26 194 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 MROH7Q68CQ1 1323 aa1.61□□□□□ -2.15
SMC4-207ENST00000467263 BRCA1P38398 1863 aaKnown RBP1.6□□□□□ -2.15
SMC4-207ENST00000467263 KBTBD11-OT1A0A1B0GTJ5 212 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 E7EQL1 145 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 C3orf84H3BNL1 204 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 SNX4O95219 450 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 NRASP01111 189 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 HRASP01112 189 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 KRASP01116 189 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 IGHV1-46P01743 117 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 ERCC1P07992 297 aaPredicted RBP1.6□□□□□ -2.15
SMC4-207ENST00000467263 RAB5AP20339 215 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 RPS15AP62244 130 aaKnown RBP1.6□□□□□ -2.15
SMC4-207ENST00000467263 ZNF660Q6AZW8 331 aaPredicted RBP1.6□□□□□ -2.15
SMC4-207ENST00000467263 AMMECR1LQ6DCA0 310 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms