RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 RELBQ01201 579 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 SRSF4Q08170 494 aaKnown RBP15.82■□□□□ 0.12
COL9A3-206ENST00000466532 TRIM25Q14258 630 aaKnown RBP15.82■□□□□ 0.12
COL9A3-206ENST00000466532 WDR82Q6UXN9 313 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 PRSS45Q7RTY3 260 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 ARHGAP24Q8N264 748 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 FGFRL1Q8N441 504 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 IQCF1Q8N6M8 205 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 SCCPDHQ8NBX0 429 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 OR52H1Q8NGJ2 320 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 TBC1D15Q8TC07 691 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 SSMEM1Q8WWF3 244 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 WFDC12Q8WWY7 111 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 AMELYQ99218 206 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 CCL13Q99616 98 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 NIPSNAP1Q9BPW8 284 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 PAPOLGQ9BWT3 736 aaKnown RBP15.82■□□□□ 0.12
COL9A3-206ENST00000466532 OR10A2Q9H208 303 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 PPP1R3EQ9H7J1 279 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 CNTD2Q9H8S5 307 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 A0A1B0GW55 424 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 H3BN98 237 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 GLCEO94923 617 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 NDUFA7O95182 113 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 DUX4L2P0CJ85 424 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 DUX4L3P0CJ86 424 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 DUX4L4P0CJ87 422 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 DUX4L5P0CJ88 424 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 DUX4L6P0CJ89 424 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 DUX4L7P0CJ90 424 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 GNALP38405 381 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 GSK3AP49840 483 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 ELF3P78545 371 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-206ENST00000466532 MS4A2Q01362 244 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 KLHL12Q53G59 568 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 WDR38Q5JTN6 314 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 OLFML2AQ68BL7 652 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 DUX4L9Q6RFH8 374 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-206ENST00000466532 CD300LDQ6UXZ3 194 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 SHFQ7M4L6 423 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 PDZD9Q8IXQ8 264 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 CSNK2A3Q8NEV1 391 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 PGAM5Q96HS1 289 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 NSL1Q96IY1 281 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 ZNF319Q9P2F9 582 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 DUX4Q9UBX2 424 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 RHBDD3Q9Y3P4 386 aa15.81■□□□□ 0.12
COL9A3-206ENST00000466532 A0A0U1RQK1 487 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 CLPSL1A2RUU4 121 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.8■□□□□ 0.12
COL9A3-206ENST00000466532 H2BFMP0C1H6 154 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 OPRL1P41146 370 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 NAA10P41227 235 aaPredicted RBP15.8■□□□□ 0.12
COL9A3-206ENST00000466532 CDONQ4KMG0 1287 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 SLC36A1Q7Z2H8 476 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 VMO1Q7Z5L0 202 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 FTMTQ8N4E7 242 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 FAM216BQ8N7L0 139 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 GIPC3Q8TF64 312 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 DYRK2Q92630 601 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 SEH1LQ96EE3 360 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 FEVQ99581 238 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 OR51V1Q9H2C8 321 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 ONECUT1Q9UBC0 465 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 PRPF19Q9UMS4 504 aaKnown RBP15.8■□□□□ 0.12
COL9A3-206ENST00000466532 KPTNQ9Y664 436 aa15.8■□□□□ 0.12
COL9A3-206ENST00000466532 ANXA2P2A6NMY6 339 aa15.79■□□□□ 0.12
COL9A3-206ENST00000466532 CDIPTO14735 213 aa15.79■□□□□ 0.12
COL9A3-206ENST00000466532 IGHV4-59P01825 116 aa15.79■□□□□ 0.12
COL9A3-206ENST00000466532 PAICSP22234 425 aaKnown RBP15.79■□□□□ 0.12
COL9A3-206ENST00000466532 RPL15P61313 204 aaKnown RBP15.79■□□□□ 0.12
COL9A3-206ENST00000466532 SNCBQ16143 134 aa15.79■□□□□ 0.12
COL9A3-206ENST00000466532 RHOUQ7L0Q8 258 aa15.79■□□□□ 0.12
COL9A3-206ENST00000466532 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-206ENST00000466532 TIGD4Q8IY51 512 aa15.79■□□□□ 0.12
COL9A3-206ENST00000466532 ITPKCQ96DU7 683 aa15.79■□□□□ 0.12
COL9A3-206ENST00000466532 MICU1Q9BPX6 476 aa15.79■□□□□ 0.12
COL9A3-206ENST00000466532 TLNRD1Q9H1K6 362 aa15.79■□□□□ 0.12
COL9A3-206ENST00000466532 RGCCQ9H4X1 137 aa15.79■□□□□ 0.12
COL9A3-206ENST00000466532 A0A1B0GVI7 797 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 ACOT8O14734 319 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 NDUFB3O43676 98 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 GPR137BO60478 399 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 CST1P01037 141 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 LYNP07948 512 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 RAP2AP10114 183 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 GMFBP60983 142 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 IL5RAQ01344 420 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 IKZF1Q13422 519 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 GK3PQ14409 553 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 BRICD5Q6PL45 260 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 LDLRAD3Q86YD5 345 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 GALNT4Q8N4A0 578 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 PIP4P2Q8N4L2 257 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 LY6G5BQ8NDX9 201 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 THEM6Q8WUY1 208 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 C12orf43Q96C57 262 aaKnown RBP15.78■□□□□ 0.12
COL9A3-206ENST00000466532 LRGUKQ96M69 825 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 RTL8AQ9BWD3 113 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 PDP1Q9P0J1 537 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms