RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 C1orf185Q5T7R7 199 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 OR7E24Q6IFN5 339 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 KLHL24Q6TFL4 600 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 PRSS35Q8N3Z0 413 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 DNAAF1Q8NEP3 725 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 OR52N5Q8NH56 324 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 MBD3L2Q8NHZ7 208 aaPredicted RBP16.26■□□□□ 0.19
CAPN3-209ENST00000466222 GCDHQ92947 438 aaPredicted RBP16.26■□□□□ 0.19
CAPN3-209ENST00000466222 LINC00470Q9BZP3 86 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 ELOVL3Q9HB03 270 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 BEX1Q9HBH7 125 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 TRAV8-7A0A075B6U6 113 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 G3V3Q6 166 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 WDR1O75083 606 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 TNFSF13O75888 250 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 CRYZL1O95825 349 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 MAS1P04201 325 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 GABRA1P14867 456 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 RAD52P43351 418 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 KIR3DL2P43630 455 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 MRPS34P82930 218 aaKnown RBP16.25■□□□□ 0.19
CAPN3-209ENST00000466222 ROM1Q03395 351 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 RBMS2Q15434 407 aaKnown RBP16.25■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF679Q8IYX0 411 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 FTMTQ8N4E7 242 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 PPP1R14AQ96A00 147 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 GP6Q9HCN6 339 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 MAB21L2Q9Y586 359 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 OR2A4O95047 310 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 DCTDP32321 178 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 OR3A2P47893 321 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 EXOSC2Q13868 293 aaKnown RBP16.25■□□□□ 0.19
CAPN3-209ENST00000466222 WDR38Q5JTN6 314 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 FBXW9Q5XUX1 488 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 KCTD18Q6PI47 426 aaPredicted RBP16.25■□□□□ 0.19
CAPN3-209ENST00000466222 TFAP2EQ6VUC0 442 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 SKA3Q8IX90 412 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 ELMOD2Q8IZ81 293 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 SLC22A24Q8N4F4 322 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 TSEN15Q8WW01 171 aaKnown RBP16.25■□□□□ 0.19
CAPN3-209ENST00000466222 SLAMF6Q96DU3 332 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 OR2A7Q96R45 310 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 DPCDQ9BVM2 203 aaPredicted RBP16.25■□□□□ 0.19
CAPN3-209ENST00000466222 GLRX2Q9NS18 164 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 LRP12Q9Y561 859 aa16.25■□□□□ 0.19
CAPN3-209ENST00000466222 RP1L1Q8IWN7 2480 aaPredicted RBP16.24■□□□□ 0.19
CAPN3-209ENST00000466222 UBE2QL1A1L167 161 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 GGT3PA6NGU5 568 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF587BE7ETH6 402 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 M0R233 179 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 SLC17A2O00624 439 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 IL18BPO95998 194 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 PNPP00491 289 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 RAB14P61106 215 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 TSPAN5P62079 268 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 FAM27BQ5VT28 67 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF813Q6ZN06 617 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 KRT77Q7Z794 578 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF454Q8N9F8 522 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 OR2AJ1Q8NGZ0 328 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 ASB13Q8WXK3 278 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 PNRC2Q9NPJ4 139 aaKnown RBP16.24■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF69Q9UC07 566 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF835Q9Y2P0 537 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 EMC9Q9Y3B6 208 aa16.24■□□□□ 0.19
CAPN3-209ENST00000466222 RPL36A-HNRNPH2H7BZ11 118 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 PRRG2O14669 202 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 DOK2O60496 412 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 CTAG2O75638 210 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 ITGA5P08648 1049 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 ANOS1P23352 680 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 PSMA6P60900 246 aaKnown RBP16.23■□□□□ 0.19
CAPN3-209ENST00000466222 LSM6P62312 80 aaKnown RBP16.23■□□□□ 0.19
CAPN3-209ENST00000466222 TSC22D1Q15714 1073 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 GRK1Q15835 563 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 RAB11BQ15907 218 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 RNF133Q8WVZ7 376 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 STARD4Q96DR4 205 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 SEC22CQ9BRL7 303 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 C1orf198Q9H425 327 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 SLC5A6Q9Y289 635 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 LOC100289279A0A1B0GTE1 492 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 RPS10-NUDT3A0A1W2PQS6 291 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF503-AS2A6NEH8 195 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 H3BSH0 61 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 SULT1C2O00338 296 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 ALDOBP05062 364 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 GLI4P10075 376 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 FSTP19883 344 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 M6PRP20645 277 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 MFGE8Q08431 387 aaPredicted RBP16.23■□□□□ 0.19
CAPN3-209ENST00000466222 PMPCAQ10713 525 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 ODF4Q2M2E3 257 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 OR2A2Q6IF42 318 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 OPN3Q9H1Y3 402 aaPredicted RBP16.23■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF224Q9NZL3 707 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 PIPOXQ9P0Z9 390 aa16.23■□□□□ 0.19
CAPN3-209ENST00000466222 MPC2O95563 127 aa16.22■□□□□ 0.19
CAPN3-209ENST00000466222 AKAIN1P0CW23 69 aa16.22■□□□□ 0.19
CAPN3-209ENST00000466222 TMIGD3P0DMS9 266 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms