RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 TACSTD2P09758 323 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 ACSM4P0C7M7 580 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 COX5BP10606 129 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 NR2C1P13056 603 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC25A16P16260 332 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 HOXB6P17509 224 aaKnown RBP4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 USF1P22415 310 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC2A5P22732 501 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 IGFBP5P24593 272 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 POU1F1P28069 291 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 CRABP1P29762 137 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 POLR2IP36954 125 aaKnown RBP4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 IFNGR2P38484 337 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 RAD52P43351 418 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 RASSF2P50749 326 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 RIPPLY3P57055 190 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 PCBD1P61457 104 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 RPS23P62266 143 aaKnown RBP4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 CDK5Q00535 292 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 GABPB1Q06547 395 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 GINS1Q14691 196 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 PCK2Q16822 640 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 SNAI3Q3KNW1 292 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 C6orf52Q5T4I8 152 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 AVPI1Q5T686 147 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 OR2T2Q6IF00 324 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 FAHD1Q6P587 224 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF771Q7L3S4 317 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 DCXRQ7Z4W1 244 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 OR5AS1Q8N127 324 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 LINC00471Q8N535 108 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 RFLNBQ8N5W9 214 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 NANOGP1Q8N7R0 232 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 NRACQ8N912 160 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 PROKR2Q8NFJ6 384 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 OR52L1Q8NGH7 329 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 OR1J2Q8NGS2 313 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 OR2AE1Q8NHA4 323 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 FNDC8Q8TC99 324 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 ST7LQ8TDW4 575 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 PYDC1Q8WXC3 89 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 CMBLQ96DG6 245 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 PIMREGQ9BSJ6 248 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 BCL2L14Q9BZR8 327 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 RAB1BQ9H0U4 201 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 SEMA6AQ9H2E6 1030 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 PPP1R3EQ9H7J1 279 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 KRCC1Q9NPI7 259 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 HINT3Q9NQE9 182 aaKnown RBP4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 CMC2Q9NRP2 79 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 PTTG3PQ9NZH4 202 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF319Q9P2F9 582 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 DNAJB9Q9UBS3 223 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 FBXL3Q9UKT7 428 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 KLHDC2Q9Y2U9 406 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 FKBP7Q9Y680 259 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 CCDC182A6NF36 153 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 F5H5K5 113 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 H3BN98 237 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF593O00488 134 aaPredicted RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 EBAG9O00559 213 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 SURF4O15260 269 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 MLNRO43193 412 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 PRKYO43930 277 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 SELENOFO60613 162 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 ENTPD5O75356 428 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 E2F6O75461 281 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 HLA-DQA2P01906 255 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 HLA-DPB1P04440 258 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC2A1P11166 492 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF23P17027 643 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 GSTM3P21266 225 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 KITLGP21583 273 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 GCH1P30793 250 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 OTX1P32242 354 aaPredicted RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 GRK5P34947 590 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 PMELP40967 661 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 GUCA1AP43080 201 aaPredicted RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 CRYBB2P43320 205 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC25A1P53007 311 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 CRISP1P54107 249 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 DSCR9P59020 149 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 LMO4P61968 165 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 EFNB1P98172 346 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF92Q03936 586 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 SCRN3Q0VDG4 424 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 GK2Q14410 553 aaPredicted RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 KPNB1Q14974 876 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 ATP6AP1Q15904 470 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF718Q3SXZ3 478 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 PLA1AQ53H76 456 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 KDM4DQ6B0I6 523 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 RPL13AP3Q6NVV1 102 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 PLBD1Q6P4A8 553 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 SHQ1Q6PI26 577 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 DNM1P34Q6PK57 102 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 FBXW12Q6X9E4 464 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 COLCA1Q6ZS62 124 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 CCDC121Q6ZUS5 278 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 DPY19L4Q7Z388 723 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms