RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 LDLRAD3Q86YD5 345 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 C11orf53Q8IXP5 236 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 FGFRL1Q8N441 504 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 ZNF511Q8NB15 262 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 OR52L1Q8NGH7 329 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 OR4C15Q8NGM1 316 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 OR9Q1Q8NGQ5 310 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 OR2T4Q8NH00 348 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 OR8S1Q8NH09 359 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 SLAMF6Q96DU3 332 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 CCL13Q99616 98 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 KCNJ15Q99712 375 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 MMP28Q9H239 520 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 IL1RAPQ9NPH3 570 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 CENPMQ9NSP4 180 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 ZNF446Q9NWS9 450 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 KAAG1Q9UBP8 84 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 MAGEL2Q9UJ55 1249 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 RPUSD1Q9UJJ7 312 aaKnown RBP7.98□□□□□ -1.13
USP39-212ENST00000465514 SIGLEC9Q9Y336 463 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 CDH10Q9Y6N8 788 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 COMMD3-BMI1R4GMX3 469 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 U3KQK5 164 aa7.98□□□□□ -1.13
USP39-212ENST00000465514 LCE6AA0A183 80 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 A0A1B0GW55 424 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 ANKRD30BLA7E2S9 258 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 ZNF593O00488 134 aaPredicted RBP7.97□□□□□ -1.13
USP39-212ENST00000465514 TBX1O43435 398 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 XRCC2O43543 280 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 GYPBP06028 91 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 SPARCP09486 303 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 DUX4L2P0CJ85 424 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 DUX4L3P0CJ86 424 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 DUX4L4P0CJ87 422 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 DUX4L5P0CJ88 424 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 DUX4L6P0CJ89 424 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 DUX4L7P0CJ90 424 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 HSD17B1P14061 328 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 IGLL1P15814 213 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 FMO3P31513 532 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 GRK5P34947 590 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 ENTPD1P49961 510 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 PCK2Q16822 640 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 MICBQ29980 383 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 CDONQ4KMG0 1287 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 KLHL22Q53GT1 634 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 CASC10Q5T4H9 136 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 DUX4L9Q6RFH8 374 aaPredicted RBP7.97□□□□□ -1.13
USP39-212ENST00000465514 DPY19L4Q7Z388 723 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 VMO1Q7Z5L0 202 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 WDR86Q86TI4 376 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 ZDHHC21Q8IVQ6 265 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 GALNT4Q8N4A0 578 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 SLC37A3Q8NCC5 494 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 OR8D4Q8NGM9 314 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 LRRC29Q8WV35 223 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 LRTOMTQ8WZ04 291 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 SPSB4Q96A44 273 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 NSMCE2Q96MF7 247 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 ELAC2Q9BQ52 826 aaKnown RBP7.97□□□□□ -1.13
USP39-212ENST00000465514 DPAGT1Q9H3H5 408 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 OPA3Q9H6K4 179 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 IL20Q9NYY1 176 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 ONECUT1Q9UBC0 465 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 DUX4Q9UBX2 424 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 FAM96BQ9Y3D0 163 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 KPTNQ9Y664 436 aa7.97□□□□□ -1.13
USP39-212ENST00000465514 A0A1B0GVI7 797 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 ZNF878C9JN71 531 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 ARPC2O15144 300 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 KRT36O76013 467 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 GASTP01350 101 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 ANXA2P07355 339 aaKnown RBP7.96□□□□□ -1.14
USP39-212ENST00000465514 MUC1P15941 1255 aaPredicted RBP7.96□□□□□ -1.14
USP39-212ENST00000465514 GABRA5P31644 462 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 DDOSTP39656 456 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 CX3CR1P49238 355 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 HMGA2P52926 109 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 CSNK2BP67870 215 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 FAM3AP98173 230 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 WDR38Q5JTN6 314 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 TEX30Q5JUR7 227 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 SLC35E4Q6ICL7 350 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 RPL13AP3Q6NVV1 102 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 WDR82Q6UXN9 313 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 SLC16A9Q7RTY1 509 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 KLHDC1Q8N7A1 406 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 LY6G5BQ8NDX9 201 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 OR1M1Q8NGA1 313 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 OR9Q2Q8NGE9 314 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 SGK3Q96BR1 496 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 SEH1LQ96EE3 360 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 CDRT15Q96T59 188 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 BTBD10Q9BSF8 475 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 TSSK6Q9BXA6 273 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 NMNAT2Q9BZQ4 307 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 SEMA6AQ9H2E6 1030 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 PPP1R3EQ9H7J1 279 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 RNPEPL1Q9HAU8 725 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 FBLN5Q9UBX5 448 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms