RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 ZNF248Q8NDW4 579 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 ZNF296Q8WUU4 475 aaPredicted RBP6.46□□□□□ -1.38
USP48-206ENST00000464577 SLAMF6Q96DU3 332 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 MMABQ96EY8 250 aaPredicted RBP6.46□□□□□ -1.38
USP48-206ENST00000464577 TCTN2Q96GX1 697 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 PRRX2Q99811 253 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 URM1Q9BTM9 101 aaKnown RBP6.46□□□□□ -1.38
USP48-206ENST00000464577 TMEM59Q9BXS4 323 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 PLA2G2FQ9BZM2 168 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 BCL2L14Q9BZR8 327 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 CENPMQ9NSP4 180 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 PRR13Q9NZ81 148 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 PISDQ9UG56 409 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 NPIPA1Q9UND3 350 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 AMDHD2Q9Y303 409 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 STRAPQ9Y3F4 350 aaKnown RBP6.46□□□□□ -1.38
USP48-206ENST00000464577 KIF26BQ2KJY2 2108 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 C2orf16Q68DN1 1984 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 M0R036 132 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SOX1O00570 391 aaPredicted RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 TXNL1O43396 289 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 ZNF354AO60765 605 aaPredicted RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 CA11O75493 328 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 NUDT14O95848 222 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 DDAH2O95865 285 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SFTPBP07988 381 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 HOXB5P09067 269 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SPTBP11277 2137 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 NQO2P16083 231 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 PI3P19957 117 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 PTGER4P35408 488 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 HAAOP46952 286 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 OR3A2P47893 321 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 HTR5AP47898 357 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 ID4P47928 161 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 GABRA4P48169 554 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 TMEM50BP56557 158 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 TMEM33P57088 247 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 HSD11B2P80365 405 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 FMODQ06828 376 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 PPA1Q15181 289 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 MIDNQ504T8 468 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 KRBOX4Q5JUW0 171 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 TMPRSS9Q7Z410 1059 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 TMEM151BQ8IW70 566 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 PRR22Q8IZ63 422 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 FAM89BQ8N5H3 189 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 WDSUB1Q8N9V3 476 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 TMEM104Q8NE00 496 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 OR10H5Q8NGA6 315 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SNIP1Q8TAD8 396 aaKnown RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 FNDC9Q8TBE3 224 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SLC22A8Q8TCC7 542 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 GPR119Q8TDV5 335 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 ZNF721Q8TF20 911 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 INTS12Q96CB8 462 aaKnown RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 MRPL38Q96DV4 380 aaKnown RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 DNAJA3Q96EY1 480 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 GINS3Q9BRX5 216 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 PAPOLGQ9BWT3 736 aaKnown RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 TBL1XR1Q9BZK7 514 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 FOXQ1Q9C009 403 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 CHRDQ9H2X0 955 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SMDT1Q9H4I9 107 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SPACA1Q9HBV2 294 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 PNO1Q9NRX1 252 aaKnown RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 LANCL2Q9NS86 450 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 GSKIPQ9P0R6 139 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 LUZP4Q9P127 313 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 KLHL13Q9P2N7 655 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 C14orf166Q9Y224 244 aaKnown RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 TMEM131Q92545 1883 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 COL5A1P20908 1838 aaPredicted RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 BORCS7-ASMTA0A0B4J1R7 106 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 hCG_1809904A0A1W2PP81 198 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 A0A1W2PR64 198 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 A0A1W2PRV1 198 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 LINC01553A4QN01 128 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 FOXI3A8MTJ6 420 aaPredicted RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 TMEM150CB9EJG8 249 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 MS4A18H0YCH9 400 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 RRP8O43159 456 aaKnown RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 GMFGO60234 142 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 WISP1O95388 367 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 CTSDP07339 412 aaPredicted RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 HLA-DOBP13765 273 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 HOXB2P14652 356 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 BCKDHBP21953 392 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 CCL1P22362 96 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 GLRA1P23415 457 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SULT1A1P50225 295 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SNU13P55769 128 aaKnown RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 RAB2AP61019 212 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 CSNK2A1P68400 391 aaPredicted RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 HHEXQ03014 270 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 ARFRP1Q13795 201 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 ARL6IP1Q15041 203 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 MS4A18Q3C1V0 323 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 RTL6Q6ICC9 239 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 DBX2Q6ZNG2 339 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms