RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 SERPINB12Q96P63 405 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 CALN1Q9BXU9 219 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 GABARAPL3Q9BY60 117 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 NAA50Q9GZZ1 169 aaKnown RBP3.29□□□□□ -1.88
PTCD3-205ENST00000464541 ZNF430Q9H8G1 570 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-205ENST00000464541 WDR54Q9H977 334 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 MRM3Q9HC36 420 aaKnown RBP3.29□□□□□ -1.88
PTCD3-205ENST00000464541 SIRT7Q9NRC8 400 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 RMND1Q9NWS8 449 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 SHPKQ9UHJ6 478 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 MN1Q10571 1320 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-205ENST00000464541 TTC21AQ8NDW8 1320 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 RAD50Q92878 1312 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 CDHR2Q9BYE9 1310 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 IGHV5-51A0A0C4DH38 117 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 A0A1B0GVI7 797 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 GOLGA8JA6NMD2 632 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 GOLGA8KD6RF30 607 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 INS-IGF2F8WCM5 200 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 GOLGA8MH3BSY2 632 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 CLDN34H7C241 214 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 H7C2Y5 167 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 hCG_2039718K7EN88 272 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 SULT1C2O00338 296 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 GATCO43716 136 aaKnown RBP3.28□□□□□ -1.88
PTCD3-205ENST00000464541 CLDN11O75508 207 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 SERPINA5P05154 406 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 TLX1NBP0CAT3 122 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 GOLGA8HP0CJ92 632 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 SLC35E2BP0CK96 405 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 RD3LP0DJH9 198 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 MLNP12872 115 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 TEAD1P28347 426 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 MAGEA6P43360 314 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 CSNK1A1P48729 337 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 XKP51811 444 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 MLF1P58340 268 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 OR2B8PP59922 312 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 RPS21P63220 83 aaKnown RBP3.28□□□□□ -1.88
PTCD3-205ENST00000464541 EXOC3L4Q17RC7 722 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 C5orf64Q2M2E5 130 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 TTMPQ5BVD1 217 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 RBM48Q5RL73 367 aaKnown RBP3.28□□□□□ -1.88
PTCD3-205ENST00000464541 IDNKQ5T6J7 187 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 TTC33Q6PID6 262 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-205ENST00000464541 MBOAT1Q6ZNC8 495 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 Q6ZR03 302 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 STRADAQ7RTN6 431 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 FUNDC1Q8IVP5 155 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 BOD1L2Q8IYS8 172 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 VKORC1L1Q8N0U8 176 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 KIF2BQ8N4N8 673 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 CDRT4Q8N9R6 151 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 RPEQ96AT9 228 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 S100PBPQ96BU1 408 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 WFIKKN1Q96NZ8 548 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 MS4A4EQ96PG1 132 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 OR2A5Q96R48 311 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 ZNF426Q9BUY5 554 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 ING2Q9H160 280 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 OR51V1Q9H2C8 321 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 UGT1A7Q9HAW7 530 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 UGT1A8Q9HAW9 530 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 CLN6Q9NWW5 311 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 SDHAF2Q9NX18 166 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 WDR62O43379 1518 aa3.28□□□□□ -1.88
PTCD3-205ENST00000464541 MSH6P52701 1360 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 IGKV1D-13A0A0B4J2D9 117 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 GLYATL1P3A0A0U1RQE8 302 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 HACD1B0YJ81 288 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 MRPS12O15235 138 aaKnown RBP3.27□□□□□ -1.89
PTCD3-205ENST00000464541 SLC16A4O15374 487 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 PSIP1O75475 530 aaKnown RBP3.27□□□□□ -1.89
PTCD3-205ENST00000464541 PSMG1O95456 288 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 TDP2O95551 362 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 GIMD1P0DJR0 217 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 IGKV1-13P0DP09 117 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 OR1E1P30953 314 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 NBL1P41271 181 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 TGM4P49221 684 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 RAP1GDS1P52306 607 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 SLC7A9P82251 487 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 TFDP2Q14188 446 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 FLOT2Q14254 428 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 PRPSAP1Q14558 356 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 LY6EQ16553 131 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 NDUFAF6Q330K2 333 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 SLC36A2Q495M3 483 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 AKIRIN2Q53H80 203 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 SDHAF4Q5VUM1 108 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 RWDD4Q6NW29 188 aaKnown RBP3.27□□□□□ -1.89
PTCD3-205ENST00000464541 AHSA2Q719I0 299 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 UBALD2Q8IYN6 164 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 PGAM4Q8N0Y7 254 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 ARRDC1Q8N5I2 433 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 RNF182Q8N6D2 247 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 OR51F2Q8NH61 342 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 OR8D1Q8WZ84 308 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 RORBQ92753 470 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 CDS1Q92903 461 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms