RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 RBP2P50120 134 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF133P52736 654 aaPredicted RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ACTR1AP61163 376 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 YPEL5P62699 121 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 NKX6-1P78426 367 aaPredicted RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ZP4Q12836 540 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 FAM53BQ14153 422 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 HNF4GQ14541 408 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 EBPQ15125 230 aaKnown RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ACKR1Q16570 336 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ODF4Q2M2E3 257 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 IAH1Q2TAA2 248 aaPredicted RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 C14orf28Q4W4Y0 310 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 CT45A2Q5DJT8 189 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 FNDC7Q5VTL7 733 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 HLA-DQA1Q5Y7H0 255 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 RPL7L1Q6DKI1 246 aaKnown RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 TCEAL6Q6IPX3 200 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF529Q6P280 563 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 FAM214BQ7L5A3 538 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 SSX9Q7RTT3 188 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 BIVMQ86UB2 503 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 LHFPL1Q86WI0 220 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 LYPD6Q86Y78 171 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 YAF2Q8IY57 180 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF610Q8N9Z0 462 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ADAD2Q8NCV1 583 aaKnown RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 OR4S1Q8NGB4 309 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 OR10G6Q8NH81 332 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 FLVCR1-AS1Q8TAF5 88 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 CD300LFQ8TDQ1 290 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 FGF14Q92915 247 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 RBMXL1Q96E39 390 aaKnown RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 MISP3Q96FF7 219 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 MOGAT1Q96PD6 335 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 TSSK2Q96PF2 358 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 SPIN2AQ99865 258 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 SPIN2BQ9BPZ2 258 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 GGACTQ9BVM4 153 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 TMEM59Q9BXS4 323 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 OR11A1Q9GZK7 315 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 CNTD2Q9H8S5 307 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 CERS4Q9HA82 394 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 C19orf12Q9NSK7 152 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 GDE1Q9NZC3 331 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 TBC1D29Q9UFV1 150 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 SRPK3Q9UPE1 567 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 SLC22A13Q9Y226 551 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 MRPS28Q9Y2Q9 187 aaKnown RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 EMC9Q9Y3B6 208 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 CACNA1AO00555 2505 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 SNRNP200O75643 2136 aaKnown RBP6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 LOC100509620A0A075B734 347 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 A0A1W2PPH5 198 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 PMS2P1A4D2B8 440 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 TLCD2A6NGC4 264 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 A6NLC8 198 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 NPIPA5E9PKD4 350 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 DCTN6O00399 190 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 SIGLEC5O15389 551 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF354AO60765 605 aaPredicted RBP6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 SRSF10O75494 262 aaKnown RBP6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 UTS2O95399 124 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 NSA2O95478 260 aaKnown RBP6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 GPANK1O95872 356 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 TIMP1P01033 207 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 SFTPBP07988 381 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 OR8U8P0C7N1 319 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 LIPCP11150 499 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 NQO2P16083 231 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 CEBPBP17676 345 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 RAB4AP20338 218 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 IL12BP29460 328 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 TNFRSF4P43489 277 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 ADPRHP54922 357 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 SUMO3P55854 103 aaPredicted RBP6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 SLC26A5P58743 744 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 CSNK2A1P68400 391 aaPredicted RBP6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 QRFPP83859 136 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 SRSF3P84103 164 aaKnown RBP6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF616Q08AN1 781 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 SIGLEC14Q08ET2 396 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 PNRC1Q12796 327 aaPredicted RBP6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 IL15RAQ13261 267 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 RAB32Q13637 225 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 GNMTQ14749 295 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 SLC9A3R2Q15599 337 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 MOGAT2Q3SYC2 334 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 MIDNQ504T8 468 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 AKIRIN2Q53H80 203 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 TCEAL5Q5H9L2 206 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 C1orf140Q5VVS0 124 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 ADAM5Q6NVV9 412 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 NPSR1Q6W5P4 371 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 HEPN1Q6WQI6 88 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 MED25Q71SY5 747 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 SLC35D2Q76EJ3 337 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 GRINAQ7Z429 371 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 REC114Q7Z4M0 266 aa6.37□□□□□ -1.39
CLSTN1-204ENST00000464286 GRASPQ7Z6J2 395 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms