RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 CAB39Q9Y376 341 aaPredicted RBP18.56■□□□□ 0.56
USP4-208ENST00000464168 DHRS12A0PJE2 317 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 GPR37O15354 613 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 NDUFB3O43676 98 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 PRDX6P30041 224 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 IKZF1Q13422 519 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 CRMP1Q14194 572 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 ATPAF1Q5TC12 328 aaPredicted RBP18.55■□□□□ 0.56
USP4-208ENST00000464168 PRSS45Q7RTY3 260 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 CMTM4Q8IZR5 234 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 REEP6Q96HR9 211 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 NSMCE2Q96MF7 247 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 DCTN5Q9BTE1 182 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 TLNRD1Q9H1K6 362 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 ZNF446Q9NWS9 450 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 LYVE1Q9Y5Y7 322 aa18.55■□□□□ 0.56
USP4-208ENST00000464168 A0A1W2PRD5 423 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 A0A1W2PRF3 423 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 A0A1W2PRM7 423 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 BTBD17A6NE02 478 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 NPFFO15130 113 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 ARPC2O15144 300 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 TIPRLO75663 272 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 KRT36O76013 467 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 ANXA2P07355 339 aaKnown RBP18.54■□□□□ 0.56
USP4-208ENST00000464168 CLUP10909 449 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 SPI1P17947 270 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 TGFBR2P37173 567 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 NAA10P41227 235 aaPredicted RBP18.54■□□□□ 0.56
USP4-208ENST00000464168 SLC15A1P46059 708 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 CX3CR1P49238 355 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 GRB2P62993 217 aaKnown RBP18.54■□□□□ 0.56
USP4-208ENST00000464168 GUCA2AQ02747 115 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 TIGD6Q17RP2 521 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 KLHL12Q53G59 568 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 ZNF770Q6IQ21 691 aaPredicted RBP18.54■□□□□ 0.56
USP4-208ENST00000464168 OR5T2Q8NGG2 359 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 C8orf46Q8TAG6 207 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 TNFRSF14Q92956 283 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 RHBDD3Q9Y3P4 386 aa18.54■□□□□ 0.56
USP4-208ENST00000464168 hCG_38984A0A1B0GV85 526 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 CDIPTO14735 213 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 GASTP01350 101 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 SELLP14151 372 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 EEF1B2P24534 225 aaKnown RBP18.53■□□□□ 0.56
USP4-208ENST00000464168 GSK3AP49840 483 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 SLC25A1P53007 311 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 EGR3Q06889 387 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 KLRD1Q13241 179 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 C2orf68Q2NKX9 166 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 STUMQ69YW2 141 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 RASSF6Q6ZTQ3 369 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 PNKDQ8N490 385 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 TSSK6Q9BXA6 273 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 HAO2Q9NYQ3 351 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 ZNF319Q9P2F9 582 aa18.53■□□□□ 0.56
USP4-208ENST00000464168 LRRC10Q5BKY1 277 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 LINC01590Q5TEZ4 76 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 SLC35E4Q6ICL7 350 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 C1orf122Q6ZSJ8 110 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 FAM57BQ71RH2 274 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 GALNT4Q8N4A0 578 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 OR6K6Q8NGW6 343 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 OR4Q3Q8NH05 313 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 ITPKCQ96DU7 683 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 ELAC2Q9BQ52 826 aaKnown RBP18.52■□□□□ 0.56
USP4-208ENST00000464168 WDR13Q9H1Z4 485 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 TOR3AQ9H497 397 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 TBC1D23Q9NUY8 699 aa18.52■□□□□ 0.56
USP4-208ENST00000464168 TNFRSF11BO00300 401 aa18.51■□□□□ 0.55
USP4-208ENST00000464168 SAA4P35542 130 aa18.51■□□□□ 0.55
USP4-208ENST00000464168 GMFBP60983 142 aa18.51■□□□□ 0.55
USP4-208ENST00000464168 EIF2B1Q14232 305 aaKnown RBP18.51■□□□□ 0.55
USP4-208ENST00000464168 SAMD4BQ5PRF9 694 aaKnown RBP18.51■□□□□ 0.55
USP4-208ENST00000464168 LINC00471Q8N535 108 aa18.51■□□□□ 0.55
USP4-208ENST00000464168 OR52H1Q8NGJ2 320 aa18.51■□□□□ 0.55
USP4-208ENST00000464168 OR5R1Q8NH85 324 aa18.51■□□□□ 0.55
USP4-208ENST00000464168 RNF133Q8WVZ7 376 aa18.51■□□□□ 0.55
USP4-208ENST00000464168 H1FXQ92522 213 aaKnown RBP18.51■□□□□ 0.55
USP4-208ENST00000464168 CDRT15Q96T59 188 aa18.51■□□□□ 0.55
USP4-208ENST00000464168 PAPOLGQ9BWT3 736 aaKnown RBP18.51■□□□□ 0.55
USP4-208ENST00000464168 SP140LQ9H930 580 aa18.51■□□□□ 0.55
USP4-208ENST00000464168 SNTG1Q9NSN8 517 aa18.51■□□□□ 0.55
USP4-208ENST00000464168 NOTCH3Q9UM47 2321 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 MEIOCA2RUB1 952 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 PAHP00439 452 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 TFF1P04155 84 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 CSF1P09603 554 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 CFL1P23528 166 aaKnown RBP18.5■□□□□ 0.55
USP4-208ENST00000464168 HSD11B1P28845 292 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 GNALP38405 381 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 UBE2E1P51965 193 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 BLVRAP53004 296 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 ZNF121P58317 390 aaPredicted RBP18.5■□□□□ 0.55
USP4-208ENST00000464168 CSNK2A3Q8NEV1 391 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 RAB3IPQ96QF0 476 aaPredicted RBP18.5■□□□□ 0.55
USP4-208ENST00000464168 MICU1Q9BPX6 476 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 ABHD6Q9BV23 337 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 DNTTIP1Q9H147 329 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 PPA2Q9H2U2 334 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms