RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 BTN2A1Q7KYR7 527 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 WDR86Q86TI4 376 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 ADGRG5Q8IZF4 528 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 GALNT4Q8N4A0 578 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 IQCF1Q8N6M8 205 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 CCDC197Q8NCU1 140 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 OR1M1Q8NGA1 313 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 LRRC29Q8WV35 223 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 GATAD2BQ8WXI9 593 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 TMIGD2Q96BF3 282 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 C12orf43Q96C57 262 aaKnown RBP11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 AMELYQ99218 206 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 SIRPDQ9H106 197 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 RASSF4Q9H2L5 321 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 ABCB9Q9NP78 766 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 POMT1Q9Y6A1 747 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 AQP12BA6NM10 295 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 PRR23D1E9PI22 279 aaPredicted RBP11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 GPR37O15354 613 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 FCN3O75636 299 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 H2BFMP0C1H6 154 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 PRR23D2P0DMB1 279 aaPredicted RBP11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 GNALP38405 381 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 RPL15P61313 204 aaKnown RBP11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 WDR82Q6UXN9 313 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 AQP12AQ8IXF9 295 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 OTOSQ8NHW6 89 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 ITFG2Q969R8 447 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 OTULINQ96BN8 352 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 CCDC124Q96CT7 223 aaKnown RBP11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 ITPKCQ96DU7 683 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 PGAM5Q96HS1 289 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 MICU1Q9BPX6 476 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 OR51V1Q9H2C8 321 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 CNTD2Q9H8S5 307 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 TAS2R1Q9NYW7 299 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 DNAJC27Q9NZQ0 273 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 ZNF319Q9P2F9 582 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 ZNF391Q9UJN7 358 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 RHBDD3Q9Y3P4 386 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 MPC1Q9Y5U8 109 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 KPTNQ9Y664 436 aa11.88□□□□□ -0.51
SNRNP40-203ENST00000463988 IGHV1-69DA0A0B4J2H0 117 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 FAM181BA6NEQ2 426 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 ANXA2P2A6NMY6 339 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 PRODHO43272 600 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 CST4P01036 141 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 IGHV1-69P01742 117 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 LYNP07948 512 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 MELTFP08582 738 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 GINS1Q14691 196 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 FAM76BQ5HYJ3 339 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 ATPAF1Q5TC12 328 aaPredicted RBP11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 SLC36A1Q7Z2H8 476 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 LY6G5BQ8NDX9 201 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 OR10Z1Q8NGY1 313 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 OR4F5Q8NH21 305 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 SSMEM1Q8WWF3 244 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 PAPOLGQ9BWT3 736 aaKnown RBP11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 NIPAL2Q9H841 368 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 ACOXLQ9NUZ1 547 aa11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 PDP1Q9P0J1 537 aaPredicted RBP11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 RPUSD1Q9UJJ7 312 aaKnown RBP11.87□□□□□ -0.51
SNRNP40-203ENST00000463988 IGHV3OR15-7A0A075B7D8 119 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 TMEM210A6NLX4 147 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 GNGT2O14610 69 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 NDUFA7O95182 113 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 CRYBA1P05813 215 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 OSMP13725 252 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 MDKP21741 143 aaPredicted RBP11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 POU1F1P28069 291 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 ARF6P62330 175 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 CSNK2BP67870 215 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 CDK5Q00535 292 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 POU4F2Q12837 409 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 CDONQ4KMG0 1287 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 WDR38Q5JTN6 314 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 SLC35D3Q5M8T2 416 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 RUSC1-AS1Q66K80 236 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 PLBD1Q6P4A8 553 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 KRT74Q7RTS7 529 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 TMEM179BQ7Z7N9 219 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 TBC1D15Q8TC07 691 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 CANT1Q8WVQ1 401 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 OR5P3Q8WZ94 311 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 ST8SIA4Q92187 359 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 CLPTM1LQ96KA5 538 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 CCL13Q99616 98 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 THTPAQ9BU02 230 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 RTL8AQ9BWD3 113 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 DNTTIP1Q9H147 329 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 YY1AP1Q9H869 796 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 ZNF556Q9HAH1 456 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 BEX1Q9HBH7 125 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 BRD7Q9NPI1 651 aa11.86□□□□□ -0.51
SNRNP40-203ENST00000463988 A0A1B0GVI7 797 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 ACOD1A6NK06 481 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 CDIPTO14735 213 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms