RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ASB13Q8WXK3 278 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 OR1E3Q8WZA6 343 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 NEIL2Q969S2 332 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SEH1LQ96EE3 360 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM19Q96HH6 336 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 GNRHR2Q96P88 292 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 MS4A10Q96PG2 267 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 PRRT1Q99946 306 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SLC25A21Q9BQT8 299 aaPredicted RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SLC35A5Q9BS91 424 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 NDC1Q9BTX1 674 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 GPR174Q9BXC1 333 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 KATNBL1Q9H079 304 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ADGRL4Q9HBW9 690 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 G6PC2Q9NQR9 355 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SIRT3Q9NTG7 399 aaPredicted RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 AURKAIP1Q9NWT8 199 aaPredicted RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 DDIT4Q9NX09 232 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 PRR13Q9NZ81 148 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 OR5AC2Q9NZP5 309 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF107Q9UII5 783 aaPredicted RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 RCL1Q9Y2P8 373 aaKnown RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 POMT1Q9Y6A1 747 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 DNAJC25-GNG10A0A024R161 153 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 TRAV18A0A075B6X5 111 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 A0A1B0GTI1 187 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ODAMA1E959 279 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 TSPAN11A1L157 253 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ANKRD66B4E2M5 251 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 G3V3Y1 287 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 M0R3H8 397 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 GPR39O43194 453 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ONECUT2O95948 504 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 IGLV1-40P01703 118 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 CTSLP07711 333 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 IL3P08700 152 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ACRP10323 421 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 DGKAP23743 735 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 TEAD1P28347 426 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 OR3A2P47893 321 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 LSSP48449 732 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 HNRNPA3P51991 378 aaKnown RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 STC1P52823 247 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 HMGA2P52926 109 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 HMGCS2P54868 508 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 BIDP55957 195 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 BACE1P56817 501 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 NTHL1P78549 312 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 CFHR1Q03591 330 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SMAGPQ0VAQ4 97 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 MESP2Q0VG99 397 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 PPP1R1AQ13522 171 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 NR0B2Q15466 257 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 MPV17LQ2QL34 196 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SNAI3Q3KNW1 292 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF260Q3ZCT1 412 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 TP53I3Q53FA7 332 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SIRPB2Q5JXA9 342 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 CPTPQ5TA50 214 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM268Q5VZI3 342 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 WBP2NLQ6ICG8 309 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 NOXRED1Q6NXP6 359 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 RPUSD3Q6P087 351 aaKnown RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 FIGLAQ6QHK4 219 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 KLHL24Q6TFL4 600 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 DPPA3Q6W0C5 159 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM144Q7Z5S9 345 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ADCK2Q7Z695 626 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ATG4DQ86TL0 474 aaPredicted RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF679Q8IYX0 411 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 AGBL5Q8NDL9 886 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 OR4D5Q8NGN0 318 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 OR1N2Q8NGR9 330 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 OR6N2Q8NGY6 317 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 OR51F2Q8NH61 342 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF563Q8TA94 476 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM186Q96B77 213 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 FAM71F1Q96KD3 344 aaPredicted RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 CITED1Q99966 193 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 WFDC6Q9BQY6 131 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 CABLES2Q9BTV7 478 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SLC12A9Q9BXP2 914 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SLC5A7Q9GZV3 580 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SLC32A1Q9H598 525 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 C7orf69Q9H7B7 122 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 RPF1Q9H9Y2 349 aaKnown RBP3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SLC35D1Q9NTN3 355 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 IL17CQ9P0M4 197 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 CLN8Q9UBY8 286 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 HSPB7Q9UBY9 170 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SERGEFQ9UGK8 458 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SLC25A13Q9UJS0 675 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 SERTAD3Q9UJW9 196 aa3.21□□□□□ -1.9
COL8A1-205ENST00000463753 ARID2Q68CP9 1835 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 A0A0A6YYH2 397 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 A0A1B0GUS0 222 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 A6NJ64 397 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 PRR19A6NJB7 356 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 RAB27BO00194 218 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms