RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 WDR82Q6UXN9 313 aa17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 FTMTQ8N4E7 242 aa17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 BOLLQ8N9W6 283 aaKnown RBP17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 PNLDC1Q8NA58 520 aaKnown RBP17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 DNAJC9Q8WXX5 260 aa17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 C12orf43Q96C57 262 aaKnown RBP17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 ITPKCQ96DU7 683 aa17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 NRBF2Q96F24 287 aa17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 TECTBQ96PL2 329 aa17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 ABCB9Q9NP78 766 aa17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 NOX4Q9NPH5 578 aa17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 MPC1Q9Y5U8 109 aa17.03■□□□□ 0.32
PDLIM4-205ENST00000463615 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 SELENOFO60613 162 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 FKBP6O75344 327 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 E2F6O75461 281 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 CST4P01036 141 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 IL5RAQ01344 420 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 FLOT2Q14254 428 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 FAM76BQ5HYJ3 339 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 SHISA2Q6UWI4 295 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 CPOQ8IVL8 374 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 HS3ST5Q8IZT8 346 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 OTULINQ96BN8 352 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 SLC7A6OSQ96CW6 309 aaPredicted RBP17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 PGAM5Q96HS1 289 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 DUX5Q96PT3 197 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 TBX15Q96SF7 602 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 FAM53CQ9NYF3 392 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 DNAJC27Q9NZQ0 273 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 RHBDD3Q9Y3P4 386 aa17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 SOX21Q9Y651 276 aaPredicted RBP17.02■□□□□ 0.32
PDLIM4-205ENST00000463615 hCG_1807616A0A1W2PRN6 198 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 SRRM5B3KS81 715 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 GYG2O15488 501 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 GYPAP02724 150 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 ALOX5APP20292 161 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 GNALP38405 381 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 NAA10P41227 235 aaPredicted RBP17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 PSMA6P60900 246 aaKnown RBP17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 IL13RA1P78552 427 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 CBX1P83916 185 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 MICBQ29980 383 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 DEGS2Q6QHC5 323 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 OR10Z1Q8NGY1 313 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 LRRC29Q8WV35 223 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 WDFY2Q96P53 400 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 MICU1Q9BPX6 476 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 TEX12Q9BXU0 123 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 SIRPDQ9H106 197 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 POMPQ9Y244 141 aa17.01■□□□□ 0.31
PDLIM4-205ENST00000463615 ACOD1A6NK06 481 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 TMEM210A6NLX4 147 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 POM121CA8CG34 1229 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 DVL1O14640 695 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 GPR37O15354 613 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 PRKACGP22612 351 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 ACKR3P25106 362 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 CSNK2BP67870 215 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 PDCD1Q15116 288 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 DEFB112Q30KQ8 113 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 ATPAF1Q5TC12 328 aaPredicted RBP17■□□□□ 0.31
PDLIM4-205ENST00000463615 C16orf87Q6PH81 154 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 BRD3OSQ6XYD6 125 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 SPATA24Q86W54 205 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 TMEM86BQ8N661 226 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 THEM6Q8WUY1 208 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 PAPOLGQ9BWT3 736 aaKnown RBP17■□□□□ 0.31
PDLIM4-205ENST00000463615 YIPF3Q9GZM5 350 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 KIF17Q9P2E2 1029 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 KLHDC2Q9Y2U9 406 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 PCDHGB1Q9Y5G3 927 aa17■□□□□ 0.31
PDLIM4-205ENST00000463615 CENPVL3A0A0U1RRI6 287 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 ANXA2P2A6NMY6 339 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 TMPRSS2O15393 492 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 SPRY1O43609 319 aaPredicted RBP16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 TOX4O94842 621 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 SFTPBP07988 381 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 DCTDP32321 178 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 FAHD1Q6P587 224 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 Q6YL49 198 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 BTN2A1Q7KYR7 527 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 LY6G5BQ8NDX9 201 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 BBS1Q8NFJ9 593 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 OR5P3Q8WZ94 311 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 LYZL4Q96KX0 146 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 PCGF1Q9BSM1 259 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 RTL8AQ9BWD3 113 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 DNTTIP1Q9H147 329 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 PPP1R3EQ9H7J1 279 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 RPUSD1Q9UJJ7 312 aaKnown RBP16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 MMP24Q9Y5R2 645 aa16.99■□□□□ 0.31
PDLIM4-205ENST00000463615 A0A0U1RQV5 110 aa16.98■□□□□ 0.31
PDLIM4-205ENST00000463615 DNAJC8O75937 253 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-205ENST00000463615 TGM4P49221 684 aa16.98■□□□□ 0.31
PDLIM4-205ENST00000463615 CRISP1P54107 249 aa16.98■□□□□ 0.31
PDLIM4-205ENST00000463615 PRR31Q5SQ13 230 aa16.98■□□□□ 0.31
PDLIM4-205ENST00000463615 METTL11BQ5VVY1 283 aa16.98■□□□□ 0.31
PDLIM4-205ENST00000463615 SLC36A1Q7Z2H8 476 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms