RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 ORMDL2Q53FV1 153 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 TMEM236Q5W0B7 351 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 STEAP4Q687X5 459 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 CLEC6AQ6EIG7 209 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 ERICH5Q6P6B1 374 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 PP632Q6XCG6 107 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 FAM92BQ6ZTR7 304 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 LRRC52Q8N7C0 313 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 ZNF433Q8N7K0 673 aaPredicted RBP2.69□□□□□ -1.98
USH2A-203ENST00000463147 OR6K2Q8NGY2 324 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 OR2L8Q8NGY9 312 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 CLHC1Q8NHS4 586 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 PDCD6IPQ8WUM4 868 aaKnown RBP2.69□□□□□ -1.98
USH2A-203ENST00000463147 TMEM239Q8WW34 195 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 OR5P2Q8WZ92 322 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 NTAN1Q96AB6 310 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 CCDC124Q96CT7 223 aaKnown RBP2.69□□□□□ -1.98
USH2A-203ENST00000463147 ZNF488Q96MN9 340 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 TIMM17AQ99595 171 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 TSNAXQ99598 290 aaKnown RBP2.69□□□□□ -1.98
USH2A-203ENST00000463147 TMEM243Q9BU79 118 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 C12orf10Q9HB07 376 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 NOX3Q9HBY0 568 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 SDHAF2Q9NX18 166 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 C15orf41Q9Y2V0 281 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 ACOT9Q9Y305 439 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 SIGLEC1Q9BZZ2 1709 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 IGLV11-55A0A075B6I3 123 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 IGHV5-51A0A0C4DH38 117 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 IGHV3-66A0A0C4DH42 116 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 A0A1B0GUA9 196 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 M0QXV9 152 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 RAD51BO15315 384 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 GCM2O75603 506 aaPredicted RBP2.68□□□□□ -1.98
USH2A-203ENST00000463147 TTC4O95801 387 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 SLC35E2BP0CK96 405 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 HSPD1P10809 573 aaKnown RBP2.68□□□□□ -1.98
USH2A-203ENST00000463147 PAX6P26367 422 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 MAGEA3P43357 314 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 SLC35A1P78382 337 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 CYP24A1Q07973 514 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 TPBGQ13641 420 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 GUSBP1Q15486 140 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 SNRNP35Q16560 246 aaKnown RBP2.68□□□□□ -1.98
USH2A-203ENST00000463147 AVPI1Q5T686 147 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 Q6ZT83 130 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 MTERF4Q7Z6M4 381 aaKnown RBP2.68□□□□□ -1.98
USH2A-203ENST00000463147 SETD3Q86TU7 594 aaPredicted RBP2.68□□□□□ -1.98
USH2A-203ENST00000463147 C12orf56Q8IXR9 622 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 CA13Q8N1Q1 262 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 C17orf78Q8N4C9 275 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 ATPAF2Q8N5M1 289 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 LINC01555Q8NAE3 123 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 OR6N1Q8NGY5 312 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 BLOC1S5Q8TDH9 187 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 ABHD3Q8WU67 409 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 CCDC12Q8WUD4 166 aaPredicted RBP2.68□□□□□ -1.98
USH2A-203ENST00000463147 GTF2H4Q92759 462 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 DCPSQ96C86 337 aaKnown RBP2.68□□□□□ -1.98
USH2A-203ENST00000463147 RDH12Q96NR8 316 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 SERPINB11Q96P15 392 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 TRNT1Q96Q11 434 aaKnown RBP2.68□□□□□ -1.98
USH2A-203ENST00000463147 TIMM29Q9BSF4 260 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 SLC25A39Q9BZJ4 359 aaPredicted RBP2.68□□□□□ -1.98
USH2A-203ENST00000463147 SIRT7Q9NRC8 400 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 VAPAQ9P0L0 249 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 WIF1Q9Y5W5 379 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 ADAMTS13Q76LX8 1427 aa2.68□□□□□ -1.98
USH2A-203ENST00000463147 CARMIL3Q8ND23 1372 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 NKX2-6A6NCS4 301 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 MKRN2OSH3BPM6 223 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 H7C2Y5 167 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 M0R1B8 84 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 SGCEO43556 437 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 RAD1O60671 282 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 SERPINB7O75635 380 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 CBR3O75828 277 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 SEMA3DO95025 777 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 CD8AP01732 235 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 RD3LP0DJH9 198 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 ZNF823P16415 610 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 MYL9P24844 172 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 CXCR1P25024 350 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 DNASE1L1P49184 302 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 RGS6P49758 472 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 ERCC8Q13216 396 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 ZNF691Q5VV52 312 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 NTM-AS1Q6ZSK4 140 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 CYP4Z1Q86W10 505 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 PCP2Q8IVA1 136 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 ZCCHC24Q8N2G6 241 aaKnown RBP2.67□□□□□ -1.98
USH2A-203ENST00000463147 OR10Z1Q8NGY1 313 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 OR13G1Q8NGZ3 307 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 OR52P1PQ8NH57 321 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 RNF138Q8WVD3 245 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 NEURL3Q96EH8 262 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 ZNF799Q96GE5 643 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 CEP170P1Q96L14 293 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 ZNF396Q96N95 335 aaPredicted RBP2.67□□□□□ -1.98
USH2A-203ENST00000463147 OR2A5Q96R48 311 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms