RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SPRYD4Q8WW59 207 aaPredicted RBP6.19□□□□□ -1.42
SMC3-202ENST00000462899 MAP6Q96JE9 813 aa6.19□□□□□ -1.42
SMC3-202ENST00000462899 PRRC1Q96M27 445 aa6.19□□□□□ -1.42
SMC3-202ENST00000462899 ATF6BQ99941 703 aa6.19□□□□□ -1.42
SMC3-202ENST00000462899 EBF4Q9BQW3 602 aa6.19□□□□□ -1.42
SMC3-202ENST00000462899 MUC13Q9H3R2 512 aa6.19□□□□□ -1.42
SMC3-202ENST00000462899 GRHPRQ9UBQ7 328 aa6.19□□□□□ -1.42
SMC3-202ENST00000462899 AURKCQ9UQB9 309 aa6.19□□□□□ -1.42
SMC3-202ENST00000462899 SF3B6Q9Y3B4 125 aaKnown RBP6.19□□□□□ -1.42
SMC3-202ENST00000462899 A0A087WUU8 490 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 hCG_1807616A0A1W2PRN6 198 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 A6NLC8 198 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 EFCAB9A8MZ26 197 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 F5H5K5 113 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 H0YHG0 523 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 H3BS24 57 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 XKRYO14609 159 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 FFAR1O14842 300 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 SIGLEC5O15389 551 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 RGS16O15492 202 aaPredicted RBP6.18□□□□□ -1.42
SMC3-202ENST00000462899 NDUFB3O43676 98 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 SYNGR1O43759 233 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 PTP4A3O75365 173 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 TXNDC12O95881 172 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 TFF1P04155 84 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 GRPP07492 148 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 PF4V1P10720 104 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 GGT2P36268 569 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 MDH1P40925 334 aaKnown RBP6.18□□□□□ -1.42
SMC3-202ENST00000462899 CDKN2AP42771 156 aaKnown RBP6.18□□□□□ -1.42
SMC3-202ENST00000462899 STX1BP61266 288 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 ST3GAL3Q11203 375 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 ECH1Q13011 328 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 MALLQ13021 153 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 KRT71Q3SY84 523 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 ZBED5Q49AG3 693 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 LRRC10Q5BKY1 277 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 GLYATL3Q5SZD4 288 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 MRPL21Q7Z2W9 205 aaKnown RBP6.18□□□□□ -1.42
SMC3-202ENST00000462899 TSEN54Q7Z6J9 526 aaKnown RBP6.18□□□□□ -1.42
SMC3-202ENST00000462899 ADCK1Q86TW2 530 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 MFSD4AQ8N468 514 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 MREGQ8N565 214 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 OR1M1Q8NGA1 313 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 OR56B2PQ8NGI1 322 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 OR5D13Q8NGL4 314 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 OR10A6Q8NH74 314 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 SLC26A7Q8TE54 656 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 SPSB4Q96A44 273 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 DUS3LQ96G46 650 aaKnown RBP6.18□□□□□ -1.42
SMC3-202ENST00000462899 HRASLS5Q96KN8 279 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 TSSK2Q96PF2 358 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 RAB3IPQ96QF0 476 aaPredicted RBP6.18□□□□□ -1.42
SMC3-202ENST00000462899 NKX3-1Q99801 234 aaPredicted RBP6.18□□□□□ -1.42
SMC3-202ENST00000462899 CYB5R1Q9UHQ9 305 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 ZNF222Q9UK12 451 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 BAG5Q9UL15 447 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 SIGLEC7Q9Y286 467 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 PCDHGB5Q9Y5G0 923 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 CAPN7Q9Y6W3 813 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 DNAH10Q8IVF4 4471 aa6.18□□□□□ -1.42
SMC3-202ENST00000462899 SORL1Q92673 2214 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 ODF3BA8MYP8 253 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 M0R135 149 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 BHLHE40O14503 412 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 ANGPTL7O43827 346 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 ZFPL1O95159 310 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 LCATP04180 440 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 PSKH1P11801 424 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 GPR4P46093 362 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 SLC18A1P54219 525 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 BLCAPP62952 87 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 RFX4Q33E94 735 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 AGKQ53H12 422 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 RABL3Q5HYI8 236 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 GPR139Q6DWJ6 353 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 LHFPL4Q7Z7J7 247 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 TMEM219Q86XT9 240 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 LINC00346Q8IVM7 164 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 MKXQ8IYA7 352 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 RNF113BQ8IZP6 322 aaKnown RBP6.17□□□□□ -1.42
SMC3-202ENST00000462899 OR5AU1Q8NGC0 362 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 OR5K1Q8NHB7 308 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 H1FXQ92522 213 aaKnown RBP6.17□□□□□ -1.42
SMC3-202ENST00000462899 ZNF799Q96GE5 643 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 OR5M11Q96RB7 305 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 CCDC28BQ9BUN5 200 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 PRSS22Q9GZN4 317 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 WDR13Q9H1Z4 485 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 PPP1R3EQ9H7J1 279 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 ELL3Q9HB65 397 aaPredicted RBP6.17□□□□□ -1.42
SMC3-202ENST00000462899 C14orf119Q9NWQ9 140 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 MRPL22Q9NWU5 206 aaKnown RBP6.17□□□□□ -1.42
SMC3-202ENST00000462899 HAO2Q9NYQ3 351 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 SLC25A10Q9UBX3 287 aaPredicted RBP6.17□□□□□ -1.42
SMC3-202ENST00000462899 POLR1DQ9Y2S0 133 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 TSSC4Q9Y5U2 329 aaPredicted RBP6.17□□□□□ -1.42
SMC3-202ENST00000462899 SNX13Q9Y5W8 968 aa6.17□□□□□ -1.42
SMC3-202ENST00000462899 TRBV23-1A0A0A0MS06 115 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms