RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	TEX30	Q5JUR7	227 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	SLC35F1	Q5T1Q4	408 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	ATPAF1	Q5TC12	328 aa	Predicted RBP	9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	DHRS7B	Q6IAN0	325 aa	Predicted RBP	9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	GLYAT	Q6IB77	296 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	HCP5	Q6MZN7	132 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815		Q6ZPA2	131 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	SLC16A9	Q7RTY1	509 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	DCXR	Q7Z4W1	244 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	PNKD	Q8N490	385 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	CYB561A3	Q8NBI2	242 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	PPP1R35	Q8TAP8	253 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	LRRC29	Q8WV35	223 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	LRTOMT	Q8WZ04	291 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	CFHR4	Q92496	578 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	UTP4	Q969X6	686 aa	Known RBP	9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	CLPTM1L	Q96KA5	538 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	KCNJ15	Q99712	375 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	THTPA	Q9BU02	230 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	NMNAT2	Q9BZQ4	307 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	OPA3	Q9H6K4	179 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	GORASP2	Q9H8Y8	452 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	SPAG4	Q9NPE6	437 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	KRCC1	Q9NPI7	259 aa	Predicted RBP	9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	SIRT7	Q9NRC8	400 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	ZNF319	Q9P2F9	582 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	FBLN5	Q9UBX5	448 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	SAMD4A	Q9UPU9	718 aa	Known RBP	9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	FAM32A	Q9Y421	112 aa	Known RBP	9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815		A6NLC8	198 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	NPFF	O15130	113 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	GADD45G	O95257	159 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	HLA-DQA2	P01906	255 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	TFF1	P04155	84 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	FBP1	P09467	338 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	HSD17B1	P14061	328 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	TGFBR2	P37173	567 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	PRKX	P51817	358 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	EFNB2	P52799	333 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	SPIB	Q01892	262 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	SPATS1	Q496A3	300 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	SLC35E4	Q6ICL7	350 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	ZNF770	Q6IQ21	691 aa	Predicted RBP	9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	ARHGAP24	Q8N264	748 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	SLC37A3	Q8NCC5	494 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	OR51L1	Q8NGJ5	315 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	C17orf50	Q8WW18	174 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	SGK3	Q96BR1	496 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	C12orf43	Q96C57	262 aa	Known RBP	9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	SLAMF6	Q96DU3	332 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	ITPKC	Q96DU7	683 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	C14orf119	Q9NWQ9	140 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	ONECUT1	Q9UBC0	465 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	CDH10	Q9Y6N8	788 aa		9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	TET2	Q6N021	2002 aa	Predicted RBP	9.12	□□□□□ -0.95
PTPN7-204	ENST00000462815	hCG_1807616	A0A1W2PRN6	198 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	GPR37	O15354	613 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	XRCC2	O43543	280 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	OPN1MW	P04001	364 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	OPN1MW2	P0DN77	364 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	OPN1MW3	P0DN78	364 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	ZNF823	P16415	610 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	RRM2	P31350	389 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	SAA4	P35542	130 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	DDOST	P39656	456 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	ENTPD1	P49961	510 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	DGUOK	Q16854	277 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	MICB	Q29980	383 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	SAMD4B	Q5PRF9	694 aa	Known RBP	9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	LINC01590	Q5TEZ4	76 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	ZNF788	Q6ZQV5	615 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	C1orf122	Q6ZSJ8	110 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	LNX2	Q8N448	690 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	RNF148	Q8N7C7	305 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	ZNF511	Q8NB15	262 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	PROKR2	Q8NFJ6	384 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	OR9Q1	Q8NGQ5	310 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	PYURF	Q96I23	114 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	GAFA1	Q96PS6	74 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	RAB3IP	Q96QF0	476 aa	Predicted RBP	9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	COPS4	Q9BT78	406 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	WDR13	Q9H1Z4	485 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	IL20	Q9NYY1	176 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	SIGLEC9	Q9Y336	463 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815		V9GYQ6	96 aa		9.11	□□□□□ -0.95
PTPN7-204	ENST00000462815	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815		A0A1W2PRD5	423 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815		A0A1W2PRF3	423 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815		A0A1W2PRM7	423 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	DHRS12	A0PJE2	317 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	ZNF878	C9JN71	531 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	ANKRD65	E5RJM6	399 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	CDIPT	O14735	213 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	ALX3	O95076	343 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	PRB2	P02812	416 aa	Predicted RBP	9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	GYPB	P06028	91 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	CSF1	P09603	554 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	CLU	P10909	449 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	ACKR3	P25106	362 aa		9.1	□□□□□ -0.95
PTPN7-204	ENST00000462815	DCTD	P32321	178 aa		9.1	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms