RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 BTNL8Q6UX41 500 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 GSG1LQ6UXU4 331 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 EIF3MQ7L2H7 374 aaKnown RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 OLIG3Q7RTU3 272 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 KLHL7Q8IXQ5 586 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 TMEM123Q8N131 208 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 PARP8Q8N3A8 854 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 TMCO5AQ8N6Q1 288 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 ZNF614Q8N883 585 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 NHLRC2Q8NBF2 726 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 OR5T2Q8NGG2 359 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 CDC26Q8NHZ8 85 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 MIPOL1Q8TD10 442 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 DCAKDQ8WVC6 231 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 GTF3AQ92664 365 aaKnown RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 RAB8BQ92930 207 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 DDIT4LQ96D03 193 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 TSSK2Q96PF2 358 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 TSPAN32Q96QS1 320 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 OR7D2Q96RA2 312 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 CCT7Q99832 543 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 CHIAQ9BZP6 476 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 IQCGQ9H095 443 aaKnown RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 RIMS4Q9H426 269 aaPredicted RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 C16orf95Q9H693 158 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 PATZ1Q9HBE1 687 aaKnown RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 CRLF2Q9HC73 371 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 ZCCHC3Q9NUD5 404 aaKnown RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 MDFICQ9P1T7 246 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 SEC14L4Q9UDX3 406 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 ATP6V1HQ9UI12 483 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 SLC35A3Q9Y2D2 325 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 PPP2R2CQ9Y2T4 447 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 TMED7Q9Y3B3 224 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 SELENOKQ9Y6D0 94 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 TRAV18A0A075B6X5 111 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 LOC102725191A0A1B0GVB3 256 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 C15orf61A6NNL5 157 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 FTCDNL1E5RQL4 147 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 SELENOFO60613 162 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 ERLIN1O75477 346 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 SUPT7LO94864 414 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 MFN2O95140 757 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 IGHV3-13P01766 116 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 KRT16P08779 473 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 RPL35AP18077 110 aaKnown RBP3.86□□□□□ -1.79
COPS3-204ENST00000462236 RPS4Y1P22090 263 aaKnown RBP3.86□□□□□ -1.79
COPS3-204ENST00000462236 IDH2P48735 452 aaKnown RBP3.86□□□□□ -1.79
COPS3-204ENST00000462236 POLR2HP52434 150 aaKnown RBP3.86□□□□□ -1.79
COPS3-204ENST00000462236 CEACAM7Q14002 265 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 FAM189A2Q15884 450 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 CEACAM16Q2WEN9 425 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 DEFB112Q30KQ8 113 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 TMEM155Q4W5P6 130 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 LBHQ53QV2 105 aaPredicted RBP3.86□□□□□ -1.79
COPS3-204ENST00000462236 SPRNQ5BIV9 151 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 FGD3Q5JSP0 725 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 PHYHD1Q5SRE7 291 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 PRAMEF8Q5VWM4 474 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 PRAMEF7Q5VXH5 474 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 ZNF774Q6NX45 483 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 NIPAL3Q6P499 406 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 FRRS1Q6ZNA5 592 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 HOGA1Q86XE5 327 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 LRRC8AQ8IWT6 810 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 SLC35F6Q8N357 371 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 KLHDC1Q8N7A1 406 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 ZSCAN4Q8NAM6 433 aaPredicted RBP3.86□□□□□ -1.79
COPS3-204ENST00000462236 OR5D16Q8NGK9 328 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 OR5P2Q8WZ92 322 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 RAB1CQ92928 201 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 PPCDCQ96CD2 204 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 BSCL2Q96G97 398 aaPredicted RBP3.86□□□□□ -1.79
COPS3-204ENST00000462236 GAL3ST1Q99999 423 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 ERP44Q9BS26 406 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 POLE3Q9NRF9 147 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 ZDHHC18Q9NUE0 388 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 C1orf109Q9NX04 203 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 DCAF16Q9NXF7 216 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 TAAR3PQ9P1P4 343 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 DNAJB9Q9UBS3 223 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 IL20RAQ9UHF4 553 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 SLC7A8Q9UHI5 535 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 FZR1Q9UM11 496 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 RASD1Q9Y272 281 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 STK38LQ9Y2H1 464 aa3.86□□□□□ -1.79
COPS3-204ENST00000462236 PLECQ15149 4684 aaKnown RBP3.85□□□□□ -1.79
COPS3-204ENST00000462236 HERC2O95714 4834 aa3.85□□□□□ -1.79
COPS3-204ENST00000462236 NKX6-3A6NJ46 265 aa3.85□□□□□ -1.79
COPS3-204ENST00000462236 CLDN24A6NM45 220 aa3.85□□□□□ -1.79
COPS3-204ENST00000462236 K7EIL1 84 aa3.85□□□□□ -1.79
COPS3-204ENST00000462236 LSM1O15116 133 aaKnown RBP3.85□□□□□ -1.79
COPS3-204ENST00000462236 STX11O75558 287 aa3.85□□□□□ -1.79
COPS3-204ENST00000462236 SNAP29O95721 258 aa3.85□□□□□ -1.79
COPS3-204ENST00000462236 HLA-HP01893 362 aa3.85□□□□□ -1.79
COPS3-204ENST00000462236 SERPINA5P05154 406 aa3.85□□□□□ -1.79
COPS3-204ENST00000462236 CD55P08174 381 aa3.85□□□□□ -1.79
COPS3-204ENST00000462236 MELTFP08582 738 aa3.85□□□□□ -1.79
COPS3-204ENST00000462236 LAMP1P11279 417 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms