RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578		H0YAE9	185 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	CDIPT	O14735	213 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	TBX1	O43435	398 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	HIST1H1C	P16403	213 aa	Known RBP	11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	NAA10	P41227	235 aa	Predicted RBP	11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	GSK3B	P49841	420 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	DGUOK	Q16854	277 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	SMARCD3	Q6STE5	483 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	DRAM2	Q6UX65	266 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	CYP4Z1	Q86W10	505 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	SDR9C7	Q8NEX9	313 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	FANK1	Q8TC84	345 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	C12orf43	Q96C57	262 aa	Known RBP	11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	GAFA1	Q96PS6	74 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	COPS4	Q9BT78	406 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	MEGF9	Q9H1U4	602 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578	HAO2	Q9NYQ3	351 aa		11.15	□□□□□ -0.62
PABPC4-208	ENST00000461578		A0A0G2JND7	137 aa		11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	TVP23A	A6NH52	213 aa		11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	H1F0	P07305	194 aa	Known RBP	11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	PSKH1	P11801	424 aa		11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	ZNF823	P16415	610 aa		11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	KRTAP10-11	P60412	298 aa		11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	ZBTB46	Q86UZ6	589 aa		11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	FAM185A	Q8N0U4	392 aa		11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	PIFO	Q8TCI5	191 aa		11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	DDO	Q99489	341 aa		11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	ANKRD19P	Q9H560	264 aa		11.14	□□□□□ -0.63
PABPC4-208	ENST00000461578	TRBV4-1	A0A0J9YWV2	114 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	OR6C68	A6NDL8	312 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	AKR7A2	O43488	359 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	XRCC2	O43543	280 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	PF4V1	P10720	104 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	NOS3	P29474	1203 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	OTX1	P32242	354 aa	Predicted RBP	11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	PYCR1	P32322	319 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	GABRA2	P47869	451 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	RAB13	P51153	203 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	SLC7A2	P52569	658 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	SEC23B	Q15437	767 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	TAF13	Q15543	124 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	AANAT	Q16613	207 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	LYPD4	Q6UWN0	246 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	ZNF788	Q6ZQV5	615 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	LIAT1	Q6ZQX7	453 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	CBLL1	Q75N03	491 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	SLC16A9	Q7RTY1	509 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	DCXR	Q7Z4W1	244 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	TMEM219	Q86XT9	240 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	MKX	Q8IYA7	352 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	DTX3	Q8N9I9	347 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	WFDC9	Q8NEX5	89 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	OR5D13	Q8NGL4	314 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	STON2	Q8WXE9	905 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	RPL3L	Q92901	407 aa	Known RBP	11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	MED30	Q96HR3	178 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	IFT27	Q9BW83	186 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	CDCA4	Q9BXL8	241 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	OR52D1	Q9H346	318 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	OPA3	Q9H6K4	179 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	CENPM	Q9NSP4	180 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	ENPP4	Q9Y6X5	453 aa		11.13	□□□□□ -0.63
PABPC4-208	ENST00000461578	TRBV23-1	A0A0A0MS06	115 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	CXCR6	O00574	342 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	GSTA4	O15217	222 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	SIGLEC5	O15389	551 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	TIPRL	O75663	272 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	SERPINA1	P01009	418 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	NPPA	P01160	153 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	PF4	P02776	101 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	COX7A1	P24310	79 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	SLC6A6	P31641	620 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	GNAL	P38405	381 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	DDOST	P39656	456 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	FAM3A	P98173	230 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	GFOD2	Q3B7J2	385 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	TMEM95	Q3KNT9	176 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	SLC35F1	Q5T1Q4	408 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	ZDHHC21	Q8IVQ6	265 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578		Q8N2B8	174 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	PAPD5	Q8NDF8	572 aa	Known RBP	11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	OR4C15	Q8NGM1	316 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	OR52J3	Q8NH60	311 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	ANGPTL6	Q8NI99	470 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	WIPF2	Q8TF74	440 aa	Predicted RBP	11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	PAPOLG	Q9BWT3	736 aa	Known RBP	11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	GID8	Q9NWU2	228 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	CMTM6	Q9NX76	183 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578	KCNG2	Q9UJ96	466 aa		11.12	□□□□□ -0.63
PABPC4-208	ENST00000461578		A0A1W2PRQ8	180 aa		11.11	□□□□□ -0.63
PABPC4-208	ENST00000461578	BBIP1	A8MTZ0	92 aa		11.11	□□□□□ -0.63
PABPC4-208	ENST00000461578	DIRAS1	O95057	198 aa		11.11	□□□□□ -0.63
PABPC4-208	ENST00000461578	ANXA2	P07355	339 aa	Known RBP	11.11	□□□□□ -0.63
PABPC4-208	ENST00000461578	ACAA1	P09110	424 aa	Predicted RBP	11.11	□□□□□ -0.63
PABPC4-208	ENST00000461578	FAH	P16930	419 aa		11.11	□□□□□ -0.63
PABPC4-208	ENST00000461578	HOXD3	P31249	432 aa	Predicted RBP	11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms