RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 SLC16A13Q7RTY0 426 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 OR10Z1Q8NGY1 313 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 OR6N1Q8NGY5 312 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 OR1S1Q8NH92 325 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 UBALD1Q8TB05 177 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 DCAKDQ8WVC6 231 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 RXFP2Q8WXD0 754 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 FRZBQ92765 325 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 L3HYPDHQ96EM0 354 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 CENPNQ96H22 339 aaPredicted RBP1.99□□□□□ -2.09
VCL-203ENST00000461383 RDH12Q96NR8 316 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 CDX2Q99626 313 aaPredicted RBP1.99□□□□□ -2.09
VCL-203ENST00000461383 RBBP8Q99708 897 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 EMC6Q9BV81 110 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 GGTLC1Q9BX51 225 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 STMN4Q9H169 189 aaPredicted RBP1.99□□□□□ -2.09
VCL-203ENST00000461383 ANKHQ9HCJ1 492 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 GGA2Q9UJY4 613 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 NDRG2Q9UN36 371 aaKnown RBP1.99□□□□□ -2.09
VCL-203ENST00000461383 OR51B2Q9Y5P1 312 aa1.99□□□□□ -2.09
VCL-203ENST00000461383 TSSC4Q9Y5U2 329 aaPredicted RBP1.99□□□□□ -2.09
VCL-203ENST00000461383 A0A0B4J2E0 115 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 RAB19A4D1S5 217 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 C5orf63A6NC05 138 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 RSPH10B2B2RC85 870 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 MANBAO00462 879 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 RFXANKO14593 260 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 TAAR5O14804 337 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 SERPINB7O75635 380 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 GATBO75879 557 aaKnown RBP1.98□□□□□ -2.09
VCL-203ENST00000461383 IGHV3-11P01762 117 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 MT-ND4P03905 459 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 CISD3P0C7P0 127 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 SLC35G6P0C7Q6 338 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 RSPH10BP0C881 870 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 THRAP10827 490 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 IGFBP3P17936 291 aaPredicted RBP1.98□□□□□ -2.09
VCL-203ENST00000461383 IL1RNP18510 177 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 AZU1P20160 251 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 CD9P21926 228 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 ME2P23368 584 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 HTR2CP28335 458 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 OPRK1P41145 380 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 KIR3DL2P43630 455 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 ERFP50548 548 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 HCCSP53701 268 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 TNNC1P63316 161 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 RPL18AQ02543 176 aaKnown RBP1.98□□□□□ -2.09
VCL-203ENST00000461383 NDUFAF6Q330K2 333 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 YIF1BQ5BJH7 314 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 FBXO48Q5FWF7 155 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 ZNF691Q5VV52 312 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 ZFP1Q6P2D0 407 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 ASCL4Q6XD76 172 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 Q6ZR03 302 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 PID1Q7Z2X4 250 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 WDR86Q86TI4 376 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 ERO1BQ86YB8 467 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 UBALD2Q8IYN6 164 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 GATSQ8NAP1 163 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 TTLQ8NG68 377 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 OR51A7Q8NH64 312 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 NDNFQ8TB73 568 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 TMEM234Q8WY98 164 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 GHSRQ92847 366 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 MSANTD3Q96H12 275 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 ZNF414Q96IQ9 312 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 GLT1D1Q96MS3 346 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 TSNAXQ99598 290 aaKnown RBP1.98□□□□□ -2.09
VCL-203ENST00000461383 NAPGQ99747 312 aaPredicted RBP1.98□□□□□ -2.09
VCL-203ENST00000461383 SULT4A1Q9BR01 284 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 UTP23Q9BRU9 249 aaKnown RBP1.98□□□□□ -2.09
VCL-203ENST00000461383 SFXN3Q9BWM7 321 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 CHID1Q9BWS9 393 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 FBXO6Q9NRD1 293 aaPredicted RBP1.98□□□□□ -2.09
VCL-203ENST00000461383 AGPAT3Q9NRZ7 376 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 TREX1Q9NSU2 369 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 RAB23Q9ULC3 237 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 CFL2Q9Y281 166 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 ARID1AO14497 2285 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 TUBGCP6Q96RT7 1819 aa1.98□□□□□ -2.09
VCL-203ENST00000461383 LOXHD1Q8IVV2 1947 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 IGSF9BQ9UPX0 1349 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 TRAV8-4A0A0B4J246 113 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 LOC100506127A0A0U1RQW1 187 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 C7orf66A4D0T2 115 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 OR5H1A6NKK0 313 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 E7EWF7 191 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 H0YJW9 148 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 M0R1X1 148 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 PRMT5O14744 637 aaPredicted RBP1.97□□□□□ -2.09
VCL-203ENST00000461383 POLR1CO15160 346 aaPredicted RBP1.97□□□□□ -2.09
VCL-203ENST00000461383 PLIN3O60664 434 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 ZNF324O75467 553 aaPredicted RBP1.97□□□□□ -2.09
VCL-203ENST00000461383 TRAPPC6AO75865 159 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 SMC2O95347 1197 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 P01737 135 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 HLA-DQB1P01920 261 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 APOA1P02647 267 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 IL4P05112 153 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms