RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 ZNF485Q8NCK3 441 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 CSNK2A3Q8NEV1 391 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 OR14K1Q8NGZ2 314 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 EGLN1Q9GZT9 426 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 MYOZ1Q9NP98 299 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-229ENST00000460826 ZNF275Q9NSD4 429 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-229ENST00000460826 ERVK-18Q9QC07 812 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 IL19Q9UHD0 177 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 ABCA1O95477 2261 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 A0A096LNT2 108 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 LOC107986453A0A1B0GWG9 222 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 LOC390937A0A1W2PQ73 354 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 OR4C45A6NMZ5 311 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 VWC2LB2RUY7 222 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 DENRO43583 198 aaKnown RBP11.84□□□□□ -0.51
HDLBP-229ENST00000460826 GMDSO60547 372 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 DHRS3O75911 302 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 CDK1P06493 297 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 CSF3P09919 207 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 CCDC159P0C7I6 412 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 CD200P41217 278 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 MAP2K3P46734 347 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 CCR9P51686 369 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 GBX2P52951 348 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-229ENST00000460826 DSCR9P59020 149 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 CSNK2BP67870 215 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 SLC35A2P78381 396 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 MRPS11P82912 194 aaKnown RBP11.84□□□□□ -0.51
HDLBP-229ENST00000460826 PRDX4Q13162 271 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 RIN1Q13671 783 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 PRAMEF6Q5VXH4 476 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 Q6ZSR3 168 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 DOK3Q7L591 496 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 KLBQ86Z14 1044 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 EGFL6Q8IUX8 553 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 SEMA6DQ8NFY4 1073 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 OR10AC1Q8NH08 325 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 MYCBPQ99417 103 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-229ENST00000460826 PAPOLGQ9BWT3 736 aaKnown RBP11.84□□□□□ -0.51
HDLBP-229ENST00000460826 FGF23Q9GZV9 251 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-229ENST00000460826 SLC22A4Q9H015 551 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 DUSP21Q9H596 190 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 SCN3BQ9NY72 215 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 PIGLQ9Y2B2 252 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 SIRT4Q9Y6E7 314 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-229ENST00000460826 V9GYS6 101 aa11.84□□□□□ -0.51
HDLBP-229ENST00000460826 ZNF816-ZNF321PA0A0X1KG74 233 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 LOC100289279A0A1B0GTE1 492 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 A0A1B0GVI7 797 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 A6NIN4 97 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 ZNF850A8MQ14 1090 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 RNF223E7ERA6 249 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 H7C1Q1 480 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 SYT7O43581 403 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 CST4P01036 141 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 MT-ND2P03891 347 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 ATP6V1B1P15313 513 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 ACHEP22303 614 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 CRHBPP24387 322 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 GIFP27352 417 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 PMELP40967 661 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 SRP9P49458 86 aaKnown RBP11.83□□□□□ -0.52
HDLBP-229ENST00000460826 RIPPLY1Q0D2K3 151 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 DMRTC1Q5HYR2 192 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 TMPRSS11AQ6ZMR5 421 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 KRT74Q7RTS7 529 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 WDR86Q86TI4 376 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 MOGAT3Q86VF5 341 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 MAPK1IP1LQ8NDC0 245 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 OR52N1Q8NH53 320 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 ZNF420Q8TAQ5 688 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-229ENST00000460826 GATAD2BQ8WXI9 593 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 PIGCQ92535 297 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 ITPKCQ96DU7 683 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 PIMREGQ9BSJ6 248 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 TMUB1Q9BVT8 246 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 BPESC1Q9GZL8 116 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 RASSF4Q9H2L5 321 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 CHODLQ9H9P2 273 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 CHCHD3Q9NX63 227 aaKnown RBP11.83□□□□□ -0.52
HDLBP-229ENST00000460826 TPRKBQ9Y3C4 175 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 MTORP42345 2549 aa11.83□□□□□ -0.52
HDLBP-229ENST00000460826 NDUFS8O00217 210 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 MTRF1O75570 445 aaKnown RBP11.82□□□□□ -0.52
HDLBP-229ENST00000460826 ZFPL1O95159 310 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 UBCP0CG48 685 aaKnown RBP11.82□□□□□ -0.52
HDLBP-229ENST00000460826 TNFRSF1AP19438 455 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 GNALP38405 381 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 NR4A2P43354 598 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 TGM4P49221 684 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 MED21Q13503 144 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 IRF3Q14653 427 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 CDK5R1Q15078 307 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 MPPED2Q15777 294 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 ZNF676Q8N7Q3 588 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 NANOGP1Q8N7R0 232 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 ZFP41Q8N8Y5 198 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 OR51A4Q8NGJ6 313 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 RPS4Y2Q8TD47 263 aa11.82□□□□□ -0.52
HDLBP-229ENST00000460826 HPSE2Q8WWQ2 592 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms