RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 CLN3Q13286 438 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 CNN3Q15417 329 aaKnown RBP12.37□□□□□ -0.43
ERCC3-205ENST00000460485 PNLIPRP3Q17RR3 467 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 KRTAP27-1Q3LI81 207 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 ACTBL2Q562R1 376 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 PHYHD1Q5SRE7 291 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 AWAT2Q6E213 333 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 CLEC18BQ6UXF7 455 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 GLDNQ6ZMI3 551 aaPredicted RBP12.37□□□□□ -0.43
ERCC3-205ENST00000460485 NCCRP1Q6ZVX7 275 aaPredicted RBP12.37□□□□□ -0.43
ERCC3-205ENST00000460485 SULF2Q8IWU5 870 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 ZNF100Q8IYN0 542 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 ZFP62Q8NB50 900 aaPredicted RBP12.37□□□□□ -0.43
ERCC3-205ENST00000460485 CLEC18CQ8NCF0 446 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 OR56B1Q8NGI3 324 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 OR4D6Q8NGJ1 314 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 GRPEL2Q8TAA5 225 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 ZFAND1Q8TCF1 268 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 SSC4DQ8WTU2 575 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 AQP3Q92482 292 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 SPSB1Q96BD6 273 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 BCO1Q9HAY6 547 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 NOX3Q9HBY0 568 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 CRLF2Q9HC73 371 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 SLC2A8Q9NY64 477 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 SCP2D1Q9UJQ7 156 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 NPTNQ9Y639 398 aa12.37□□□□□ -0.43
ERCC3-205ENST00000460485 USP9YO00507 2555 aaPredicted RBP12.37□□□□□ -0.43
ERCC3-205ENST00000460485 MED12Q93074 2177 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 NBPF19A0A087WUL8 3843 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 DISC1C4P0D8 188 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 H3BSH0 61 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 EFSO43281 561 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 XRCC2O43543 280 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 SYNGR3O43761 229 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 SSNA1O43805 119 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 MRPL33O75394 65 aaKnown RBP12.36□□□□□ -0.43
ERCC3-205ENST00000460485 CA11O75493 328 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 CD74P04233 296 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 HCKP08631 526 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 TMIGD3P0DMS9 266 aaPredicted RBP12.36□□□□□ -0.43
ERCC3-205ENST00000460485 COX5BP10606 129 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 QRFPP83859 136 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 PPA1Q15181 289 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 C4orf17Q53FE4 359 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 SPINK14Q6IE38 97 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 STEAP1BQ6NZ63 245 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 ZNF782Q6ZMW2 699 aaPredicted RBP12.36□□□□□ -0.43
ERCC3-205ENST00000460485 ZNF584Q8IVC4 421 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 OR5AS1Q8N127 324 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 STEAP2Q8NFT2 490 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 OR52N4Q8NGI2 321 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 OR4C16Q8NGL9 310 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 HAS2Q92819 552 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 SEH1LQ96EE3 360 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 POM121Q96HA1 1249 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 RADILQ96JH8 1075 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 FYTTD1Q96QD9 318 aaKnown RBP12.36□□□□□ -0.43
ERCC3-205ENST00000460485 PRRT1Q99946 306 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 GPR35Q9HC97 309 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.36□□□□□ -0.43
ERCC3-205ENST00000460485 POU2F3Q9UKI9 436 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 PLEKHA6Q9Y2H5 1048 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 MRPS28Q9Y2Q9 187 aaKnown RBP12.36□□□□□ -0.43
ERCC3-205ENST00000460485 NOSIPQ9Y314 301 aaKnown RBP12.36□□□□□ -0.43
ERCC3-205ENST00000460485 RELNP78509 3460 aa12.36□□□□□ -0.43
ERCC3-205ENST00000460485 TEP1Q99973 2627 aaKnown RBP12.36□□□□□ -0.43
ERCC3-205ENST00000460485 MEIKINA0A087WXM9 373 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 PINLYPA6NC86 204 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 GMDSO60547 372 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 KDM4BO94953 1096 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 C4BPBP20851 252 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 PRKACBP22694 351 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 MEOX1P50221 254 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 GABRG1Q8N1C3 465 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 ASCC1Q8N9N2 400 aaKnown RBP12.35□□□□□ -0.43
ERCC3-205ENST00000460485 OR10R2Q8NGX6 335 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 CAPSLQ8WWF8 208 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 DACT3Q96B18 629 aaPredicted RBP12.35□□□□□ -0.43
ERCC3-205ENST00000460485 FAM71F1Q96KD3 344 aaPredicted RBP12.35□□□□□ -0.43
ERCC3-205ENST00000460485 SIGLEC12Q96PQ1 595 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 PSMG3-AS1Q96PY0 264 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 TMEM59Q9BXS4 323 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 OPA3Q9H6K4 179 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 NPDC1Q9NQX5 325 aaPredicted RBP12.35□□□□□ -0.43
ERCC3-205ENST00000460485 ZNF175Q9Y473 711 aa12.35□□□□□ -0.43
ERCC3-205ENST00000460485 ZNF736B4DX44 427 aaPredicted RBP12.34□□□□□ -0.43
ERCC3-205ENST00000460485 ZNF587BE7ETH6 402 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 F5H5K5 113 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 MASP2O00187 686 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 RAB27BO00194 218 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 ARPC1BO15143 372 aaKnown RBP12.34□□□□□ -0.43
ERCC3-205ENST00000460485 RAB3DO95716 219 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 VSIG8P0DPA2 414 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 TLE1Q04724 770 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 FCN2Q15485 313 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 CEACAM16Q2WEN9 425 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 ZNF260Q3ZCT1 412 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms