RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 BOLLQ8N9W6 283 aaKnown RBP13.46□□□□□ -0.25
COL7A1-203ENST00000459756 C19orf18Q8NEA5 215 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 OR8B12Q8NGG6 310 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 TMEM163Q8TC26 289 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 ZFAND2BQ8WV99 257 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 CIB1Q99828 191 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 PAPOLGQ9BWT3 736 aaKnown RBP13.46□□□□□ -0.25
COL7A1-203ENST00000459756 SUCNR1Q9BXA5 334 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 OSBPL10Q9BXB5 764 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 ABCB9Q9NP78 766 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 CLN8Q9UBY8 286 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 RHBDD3Q9Y3P4 386 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 DOCK11Q5JSL3 2073 aa13.46□□□□□ -0.26
COL7A1-203ENST00000459756 TRAV38-1A0A0B4J264 116 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 TMEM269A0A1B0GVZ9 245 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 hCG_1807616A0A1W2PRN6 198 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 OOEPA6NGQ2 149 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 ANXA2P2A6NMY6 339 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 PHYHO14832 338 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 NDUFA2O43678 99 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 VENTXO95231 258 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 PPIAL4GP0DN37 164 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 FPR2P25090 351 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 NPY4RP50391 375 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 IL5RAQ01344 420 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 PAX8Q06710 450 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 ARMCX4Q5H9R4 360 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 AADACL4Q5VUY2 407 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 LYPD2Q6UXB3 125 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 BTNL3Q6UXE8 466 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 GID4Q8IVV7 300 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 ZNF679Q8IYX0 411 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 GALNT4Q8N4A0 578 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 SEMA6DQ8NFY4 1073 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 RAB40AQ8WXH6 277 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 ITFG2Q969R8 447 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 JMJD8Q96S16 334 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 MNTQ99583 582 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 MICU1Q9BPX6 476 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 RNPEPL1Q9HAU8 725 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 FAM206AQ9NX38 181 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 MPC1Q9Y5U8 109 aa13.45□□□□□ -0.26
COL7A1-203ENST00000459756 IGHV2-70DA0A0C4DH43 119 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 A0A0U1RQV5 110 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 C3orf80F5H4A9 247 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 M0R129 80 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 CST4P01036 141 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 LHBP01229 141 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 ACKR3P25106 362 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 CD80P33681 288 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 HILS1P60008 231 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 WDR25Q64LD2 544 aaPredicted RBP13.44□□□□□ -0.26
COL7A1-203ENST00000459756 SFRP4Q6FHJ7 346 aaPredicted RBP13.44□□□□□ -0.26
COL7A1-203ENST00000459756 ZNF841Q6ZN19 808 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 ZNF826PQ6ZT77 177 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 BCDIN3DQ7Z5W3 292 aaKnown RBP13.44□□□□□ -0.26
COL7A1-203ENST00000459756 WDR86Q86TI4 376 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 PQLC1Q8N2U9 271 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 GCSAMQ8N6F7 178 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 OR1M1Q8NGA1 313 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 DACT3Q96B18 629 aaPredicted RBP13.44□□□□□ -0.26
COL7A1-203ENST00000459756 ITPKCQ96DU7 683 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 LYZL4Q96KX0 146 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 OR8B4Q96RC9 309 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 IL4I1Q96RQ9 567 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 SLC6A7Q99884 636 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 RTL8AQ9BWD3 113 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 GABARAPL3Q9BY60 117 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 HAO2Q9NYQ3 351 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 NUP50Q9UKX7 468 aa13.44□□□□□ -0.26
COL7A1-203ENST00000459756 KIR2DS1A0A191URI9 304 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 PSMD9O00233 223 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 EI24O14681 340 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 RGS9O75916 674 aaPredicted RBP13.43□□□□□ -0.26
COL7A1-203ENST00000459756 RIDAP52758 137 aaKnown RBP13.43□□□□□ -0.26
COL7A1-203ENST00000459756 HOXA4Q00056 320 aaPredicted RBP13.43□□□□□ -0.26
COL7A1-203ENST00000459756 PRDX4Q13162 271 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 RCN1Q15293 331 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 ZNF829Q3KNS6 432 aaPredicted RBP13.43□□□□□ -0.26
COL7A1-203ENST00000459756 TEX36Q5VZQ5 186 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 C11orf53Q8IXP5 236 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 FAM81AQ8TBF8 368 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 RBM4BQ9BQ04 359 aaKnown RBP13.43□□□□□ -0.26
COL7A1-203ENST00000459756 TLNRD1Q9H1K6 362 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 RIBC2Q9H4K1 309 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 ADGRL4Q9HBW9 690 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 ERVK-18Q9QC07 812 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 IKZF2Q9UKS7 526 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 COPS3Q9UNS2 423 aa13.43□□□□□ -0.26
COL7A1-203ENST00000459756 TMEM210A6NLX4 147 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 ZNF850A8MQ14 1090 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 PRR32B1ATL7 298 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 TNFRSF13BO14836 293 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-203ENST00000459756 ADAM20O43506 726 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 ATP6V1B1P15313 513 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 MUC1P15941 1255 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-203ENST00000459756 CFHR2P36980 270 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 MAP2K3P46734 347 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 CXCR4P61073 352 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 CSNK2BP67870 215 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms