RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 P2RY10O00398 339 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 SIAH2O43255 324 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 MBTPS2O43462 519 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 MPZL1O95297 269 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 KLF8O95600 359 aaPredicted RBP7.54□□□□□ -1.2
VPS50-208ENST00000458707 PMP2P02689 132 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 CD5P06127 495 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 GSTP1P09211 210 aaKnown RBP7.54□□□□□ -1.2
VPS50-208ENST00000458707 ZNF823P16415 610 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 GNB3P16520 340 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 STARD6P59095 220 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 RAP1BP61224 184 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 RAP1AP62834 184 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 ZP4Q12836 540 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 TDGQ13569 410 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 NSUN5P2Q63ZY6 315 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 DNM1P34Q6PK57 102 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 DPPA2Q7Z7J5 298 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 OR4K15Q8NH41 348 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 NUBPLQ8TB37 319 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 ZNF721Q8TF20 911 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 RNF133Q8WVZ7 376 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 FGF14Q92915 247 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 SLC5A7Q9GZV3 580 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 SEC61A2Q9H9S3 476 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 PDE7BQ9NP56 450 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 FAM206AQ9NX38 181 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 MMACHCQ9Y4U1 282 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 FLVCR1Q9Y5Y0 555 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 POMT1Q9Y6A1 747 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 DNAH14Q0VDD8 3507 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 SEC16AO15027 2179 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 IGKV3D-11A0A0A0MRZ8 115 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 FAM157AC9JC47 383 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 RNASEK-C17orf49H0YIS7 233 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 TAAR5O14804 337 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 OR2T1O43869 369 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 DDAH2O95865 285 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 TTRP02766 147 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 OPN1MWP04001 364 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 CSTBP04080 98 aaKnown RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 SERPINA5P05154 406 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 QDPRP09417 244 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 OPN1MW2P0DN77 364 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 OPN1MW3P0DN78 364 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 NFYBP25208 207 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 ABCD3P28288 659 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 CD1CP29017 333 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 KCNJ3P48549 501 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 GNG10P50151 68 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 EIF5AP63241 154 aaKnown RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 SUPT4H1P63272 117 aaKnown RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 FOXO1Q12778 655 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 SQSTM1Q13501 440 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 SMCO1Q147U7 214 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 PEA15Q15121 130 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 DNLZQ5SXM8 178 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 EIF5AL1Q6IS14 154 aaKnown RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 PTCRAQ6ISU1 281 aaPredicted RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 ZNF585AQ6P3V2 769 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 PARM1Q6UWI2 310 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 GRINAQ7Z429 371 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 RABEPKQ7Z6M1 372 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 NAA40Q86UY6 237 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 LHFPL1Q86WI0 220 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 MISPQ8IVT2 679 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 PRR22Q8IZ63 422 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 OR13H1Q8NG92 308 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 MAFAQ8NHW3 353 aaPredicted RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 GPR119Q8TDV5 335 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 ASB10Q8WXI3 467 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 FGGYQ96C11 551 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 DNAJA3Q96EY1 480 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 ADAT3Q96EY9 351 aaPredicted RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 SOX7Q9BT81 388 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 RPP25Q9BUL9 199 aaKnown RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 LPAR5Q9H1C0 372 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 TMEM231Q9H6L2 316 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 OR5AC2Q9NZP5 309 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 REV3LO60673 3130 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 NCOA6Q14686 2063 aaPredicted RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 A0A0A6YYD4 124 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 C17orf51A8MQB3 221 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 MS4A18H0YCH9 400 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 MFNGO00587 321 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 ZNF217O75362 1048 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 AHSA1O95433 338 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 HCKP08631 526 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 FCGR3AP08637 254 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 H2BFMP0C1H6 154 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 SFTA3P0C7M3 94 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 PET100P0DJ07 73 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 FPR2P25090 351 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 IL12BP29460 328 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 SULT1A2P50226 295 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 CLDN6P56747 220 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 ECH1Q13011 328 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 HABP2Q14520 560 aaPredicted RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 EBPQ15125 230 aaKnown RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 MS4A18Q3C1V0 323 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms