RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 LOXL4Q96JB6 756 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 URM1Q9BTM9 101 aaKnown RBP14.62□□□□□ -0.07
CCDC43-202ENST00000457422 FOXJ2Q9P0K8 574 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 MAB21L2Q9Y586 359 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 CXCL13O43927 109 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 MTRF1O75570 445 aaKnown RBP14.62□□□□□ -0.07
CCDC43-202ENST00000457422 DBHP09172 617 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 CRYGSP22914 178 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 NTF4P34130 210 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 HRH1P35367 487 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 KISS1Q15726 138 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 DMRTC1Q5HYR2 192 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 OR52W1Q6IF63 320 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 FAM89BQ8N5H3 189 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 OR52H1Q8NGJ2 320 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 CPT1CQ8TCG5 803 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 ROBO4Q8WZ75 1007 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 BANF2Q9H503 90 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 GPR179Q6PRD1 2367 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 A0A1W2PNU3 283 aaPredicted RBP14.61□□□□□ -0.07
CCDC43-202ENST00000457422 LEUTXA8MZ59 168 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 SOCS1O15524 211 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 CFDP00746 253 aaPredicted RBP14.61□□□□□ -0.07
CCDC43-202ENST00000457422 CNR1P21554 472 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 CD96P40200 585 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 TMEM50BP56557 158 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 ESCO2Q56NI9 601 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 LY6G6FQ5SQ64 297 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 THOC7Q6I9Y2 204 aaKnown RBP14.61□□□□□ -0.07
CCDC43-202ENST00000457422 LPCAT3Q6P1A2 487 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 FAHD2BQ6P2I3 314 aaPredicted RBP14.61□□□□□ -0.07
CCDC43-202ENST00000457422 C11orf88Q6PI97 169 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 OR10D3Q8NH80 312 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 FAHD2AQ96GK7 314 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 CITED4Q96RK1 184 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 CST11Q9H112 138 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCDC43-202ENST00000457422 TMEM38BQ9NVV0 291 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 PCDHGA1Q9Y5H4 931 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 CCDC187A0A096LP49 1063 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 A0A1W2PP11 408 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 DHRS7CA6NNS2 312 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 MFNGO00587 321 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 SYNGR3O43761 229 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 IL2RAP01589 272 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 GDF1P27539 372 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 PTGFRP43088 359 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 GFRA1P56159 465 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 GMFBP60983 142 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 RPS27AP62979 156 aaKnown RBP14.61□□□□□ -0.07
CCDC43-202ENST00000457422 SRSF4Q08170 494 aaKnown RBP14.61□□□□□ -0.07
CCDC43-202ENST00000457422 FOXO1Q12778 655 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 GK2Q14410 553 aaPredicted RBP14.61□□□□□ -0.07
CCDC43-202ENST00000457422 UBE2V2Q15819 145 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 RSPO4Q2I0M5 234 aaPredicted RBP14.61□□□□□ -0.07
CCDC43-202ENST00000457422 PLA2G2CQ5R387 149 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 RIPPLY2Q5TAB7 128 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 CDCP2Q5VXM1 449 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 DRAM2Q6UX65 266 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 C17orf107Q6ZR85 190 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 NPRL2Q8WTW4 380 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 THOC3Q96J01 351 aaKnown RBP14.61□□□□□ -0.07
CCDC43-202ENST00000457422 OR10A2Q9H208 303 aa14.61□□□□□ -0.07
CCDC43-202ENST00000457422 TUBAL3A6NHL2 446 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 FOXI3A8MTJ6 420 aaPredicted RBP14.6□□□□□ -0.07
CCDC43-202ENST00000457422 SGCEO43556 437 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 CRTAPO75718 401 aaPredicted RBP14.6□□□□□ -0.07
CCDC43-202ENST00000457422 CD59P13987 128 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 FAHP16930 419 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 POU3F2P20265 443 aaPredicted RBP14.6□□□□□ -0.07
CCDC43-202ENST00000457422 ZBTB25P24278 435 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 CLDN15P56746 228 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 ACTBL2Q562R1 376 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 JMJD6Q6NYC1 403 aaPredicted RBP14.6□□□□□ -0.07
CCDC43-202ENST00000457422 AAED1Q7RTV5 226 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 SLC16A14Q7RTX9 510 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 OR5M8Q8NGP6 311 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 CRLF2Q9HC73 371 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 PIGLQ9Y2B2 252 aa14.6□□□□□ -0.07
CCDC43-202ENST00000457422 LINC01387J3KSC0 135 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 CD8AP01732 235 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 HLA-AP01891 365 aaKnown RBP14.59□□□□□ -0.07
CCDC43-202ENST00000457422 HLA-GP17693 338 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 S100A11P31949 105 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 SCRN3Q0VDG4 424 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 KRTAP27-1Q3LI81 207 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 VAX1Q5SQQ9 334 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 LYG2Q86SG7 212 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 STEAP2Q8NFT2 490 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 OR5D18Q8NGL1 313 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 HAS2Q92819 552 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 CPNE4Q96A23 557 aaPredicted RBP14.59□□□□□ -0.07
CCDC43-202ENST00000457422 CYYR1Q96J86 154 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 ALKBH3Q96Q83 286 aaPredicted RBP14.59□□□□□ -0.07
CCDC43-202ENST00000457422 OCSTAMPQ9BR26 566 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 GPR87Q9BY21 358 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 BOKQ9UMX3 212 aaPredicted RBP14.59□□□□□ -0.07
CCDC43-202ENST00000457422 RFPL4AA6NLU0 287 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 C21orf140B9A014 251 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 RFPL4AL1F8VTS6 287 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms