RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 KCNJ16Q9NPI9 418 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 HRASLS2Q9NWW9 162 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 VSX1Q9NZR4 365 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 ATXN7L1Q9ULK2 861 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 URGCP-MRPS24S4R325 110 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 KNL1Q8NG31 2342 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 IGKV1D-43A0A0B4J1Z2 117 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 HCRTR2O43614 444 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 DEDDO75618 318 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 NUDT14O95848 222 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 GAPDHP04406 335 aaKnown RBP9.13□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H1DP16402 221 aaKnown RBP9.13□□□□□ -0.95
CLIP4-208ENST00000456385 AMY2BP19961 511 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 C5AR1P21730 350 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF93P35789 620 aaPredicted RBP9.13□□□□□ -0.95
CLIP4-208ENST00000456385 CAMLGP49069 296 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 SEC13P55735 322 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF124Q15973 351 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 RPUSD3Q6P087 351 aaKnown RBP9.13□□□□□ -0.95
CLIP4-208ENST00000456385 Q7L0L9 218 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 LHFPL1Q86WI0 220 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 C12orf76Q8N812 135 aaPredicted RBP9.13□□□□□ -0.95
CLIP4-208ENST00000456385 KDF1Q8NAX2 398 aaPredicted RBP9.13□□□□□ -0.95
CLIP4-208ENST00000456385 PRRX2Q99811 253 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 SOX7Q9BT81 388 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 WFDC1Q9HC57 220 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 WDFY3Q8IZQ1 3526 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 CDC14CA4D256 554 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 SYT7O43581 403 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 TTRP02766 147 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 PRH1P02810 166 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 CLPSP04118 112 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF823P16415 610 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 PTGER4P35408 488 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 PPP1CCP36873 323 aaKnown RBP9.13□□□□□ -0.95
CLIP4-208ENST00000456385 OR3A4PP47883 348 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 GABRA4P48169 554 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 UCP2P55851 309 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 GAMTQ14353 236 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 C14orf28Q4W4Y0 310 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF529Q6P280 563 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.13□□□□□ -0.95
CLIP4-208ENST00000456385 TMEM156Q8N614 296 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 UBAC2Q8NBM4 344 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 ZDHHC12Q96GR4 267 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 IER2Q9BTL4 223 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 OR11A1Q9GZK7 315 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 NXF5Q9H1B4 397 aaKnown RBP9.13□□□□□ -0.95
CLIP4-208ENST00000456385 TXNIPQ9H3M7 391 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 PRTFDC1Q9NRG1 225 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 C19orf12Q9NSK7 152 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 PARPBPQ9NWS1 579 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 OSGIN2Q9Y236 505 aa9.13□□□□□ -0.95
CLIP4-208ENST00000456385 TRAV36DV7A0A075B6V5 113 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 A6NCN8 305 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 C2orf74A8MZ97 194 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 SOD3P08294 240 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 CXCL1P09341 107 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H1BP16401 226 aaKnown RBP9.12□□□□□ -0.95
CLIP4-208ENST00000456385 IL11P20809 199 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 MAS1LP35410 378 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 RABIFP47224 123 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 OR3A2P47893 321 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF84P51523 738 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 FUT7Q11130 342 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 GPM6BQ13491 265 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 C1orf140Q5VVS0 124 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 OPN5Q6U736 354 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 HIST2H3AQ71DI3 136 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 SPRED2Q7Z698 418 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 SLC26A10Q8NG04 563 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 MUCL1Q96DR8 90 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 GPR61Q9BZJ8 451 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 PRO1933Q9H354 126 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 GFOD1Q9NXC2 390 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 EHFQ9NZC4 300 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 ZDHHC8Q9ULC8 765 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 RCL1Q9Y2P8 373 aaKnown RBP9.12□□□□□ -0.95
CLIP4-208ENST00000456385 MEMO1Q9Y316 297 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 RFNGQ9Y644 331 aa9.12□□□□□ -0.95
CLIP4-208ENST00000456385 CDC14BO60729 498 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 ADH1BP00325 375 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 H2BFMP0C1H6 154 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 SERPINA2P20848 420 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 ANOS1P23352 680 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 DHPSP49366 369 aaPredicted RBP9.11□□□□□ -0.95
CLIP4-208ENST00000456385 RBP2P50120 134 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 CEBPGP53567 150 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 CSNK2A1P68400 391 aaPredicted RBP9.11□□□□□ -0.95
CLIP4-208ENST00000456385 FOXK1P85037 733 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 ARFRP1Q13795 201 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 SURF2Q15527 256 aaPredicted RBP9.11□□□□□ -0.95
CLIP4-208ENST00000456385 SGCBQ16585 318 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF674Q2M3X9 581 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HSD17B11Q8NBQ5 300 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 CSNK2A3Q8NEV1 391 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 OR5D14Q8NGL3 314 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 MRPL24Q96A35 216 aaKnown RBP9.11□□□□□ -0.95
CLIP4-208ENST00000456385 NTNG2Q96CW9 530 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 C1orf147Q96MC9 270 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms