RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 MTNR1AP48039 350 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 IL5RAQ01344 420 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 MFGE8Q08431 387 aaPredicted RBP14.54□□□□□ -0.08
USP39-208ENST00000455732 ZNF684Q5T5D7 378 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 SSX6Q7RTT6 188 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 PHC2Q8IXK0 858 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 OR8S1Q8NH09 359 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 ITPKCQ96DU7 683 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 PAPOLGQ9BWT3 736 aaKnown RBP14.54□□□□□ -0.08
USP39-208ENST00000455732 TMEM165Q9HC07 324 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 G6PC2Q9NQR9 355 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 UFSP2Q9NUQ7 469 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 RNF7Q9UBF6 113 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 PCDHB10Q9UN67 800 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 MPC1Q9Y5U8 109 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 PPIAL4EA0A075B759 164 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 PPIAL4CA0A0B4J2A2 164 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 SNTNA6NMZ2 147 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 CEACAM18A8MTB9 384 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 A8MXK9 166 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 PPIAL4DF5H284 164 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 LOC110117498-PIK3R3F6TDL0 507 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 SLC16A6O15403 523 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 MPZL2O60487 215 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 SULT1C4O75897 302 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 APOL3O95236 402 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 PNPP00491 289 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 KRT8P05787 483 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 PPIAL4FP0DN26 164 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 ATP6V1E1P36543 226 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 GABPB1Q06547 395 aaPredicted RBP14.53□□□□□ -0.08
USP39-208ENST00000455732 ZNF404Q494X3 552 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 ZBTB37Q5TC79 503 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 GALNT4Q8N4A0 578 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 OR10H4Q8NGA5 316 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 C8orf4Q9NR00 106 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 POLR3KQ9Y2Y1 108 aaPredicted RBP14.53□□□□□ -0.08
USP39-208ENST00000455732 PPIAL4AQ9Y536 164 aa14.53□□□□□ -0.08
USP39-208ENST00000455732 ZNF816-ZNF321PA0A0X1KG74 233 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 LOC100130705A0A1B0GUX0 176 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 ANXA2P2A6NMY6 339 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 J3QRE1 110 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 FOXH1O75593 365 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 TTRP02766 147 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 GATA3P23771 443 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 MAP2K3P46734 347 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 ACTC1P68032 377 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 ACTA1P68133 377 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 WDR86Q86TI4 376 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 ENTHD1Q8IYW4 607 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 ELMOD2Q8IZ81 293 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 RHOXF1Q8NHV9 184 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 OR51E1Q8TCB6 317 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 TBX5Q99593 518 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 MICU1Q9BPX6 476 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 TMEM246Q9BRR3 403 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 TLNRD1Q9H1K6 362 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 GPR84Q9NQS5 396 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 FAM118AQ9NWS6 357 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 SMPD3Q9NY59 655 aaPredicted RBP14.52□□□□□ -0.09
USP39-208ENST00000455732 OR52A1Q9UKL2 312 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 LRCH1Q9Y2L9 728 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 SNX5Q9Y5X3 404 aa14.52□□□□□ -0.09
USP39-208ENST00000455732 A0A0G2JMP0 313 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 A0A0X1KG70 313 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 METTL15A6NJ78 407 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 J3QLI3 93 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 DLGAP1O14490 977 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 MAGEB4O15481 346 aaPredicted RBP14.51□□□□□ -0.09
USP39-208ENST00000455732 ZNF205O95201 554 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 GRPP07492 148 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 SRP14P37108 136 aaKnown RBP14.51□□□□□ -0.09
USP39-208ENST00000455732 ISL1P61371 349 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 ZNF154Q13106 437 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 PRDX4Q13162 271 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 RCN1Q15293 331 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 FAM201AQ5SY85 155 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 BCL2L15Q5TBC7 163 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 LIPNQ5VXI9 398 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 PLEKHG7Q6ZR37 379 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 DCDC5Q6ZRR9 648 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 C1orf229Q6ZS94 237 aaPredicted RBP14.51□□□□□ -0.09
USP39-208ENST00000455732 Q6ZSR3 168 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 ZNF771Q7L3S4 317 aaPredicted RBP14.51□□□□□ -0.09
USP39-208ENST00000455732 ZDHHC23Q8IYP9 409 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 PACRGLQ8N7B6 248 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 SEMA6DQ8NFY4 1073 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 OR1M1Q8NGA1 313 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 OR4M2Q8NGB6 313 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 OR5P3Q8WZ94 311 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 RNFT2Q96EX2 444 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 RTL8AQ9BWD3 113 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 PPP1R3EQ9H7J1 279 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 RNPEPL1Q9HAU8 725 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 TRIM36Q9NQ86 728 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 C1orf123Q9NWV4 160 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 MIOXQ9UGB7 285 aa14.51□□□□□ -0.09
USP39-208ENST00000455732 A6NLC8 198 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 TMEM210A6NLX4 147 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 DHRS7CA6NNS2 312 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms