RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SLC35B3Q9H1N7 401 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 EHFQ9NZC4 300 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 LAMA3Q16787 3333 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 A0A1W2PPE2 198 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 NPIPA5E9PKD4 350 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 SDCBPO00560 298 aaPredicted RBP12.15□□□□□ -0.46
PTPRE-204ENST00000455661 SEC11BP0C7V7 166 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 DANCRP0C864 163 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 NME1P15531 152 aaKnown RBP12.15□□□□□ -0.46
PTPRE-204ENST00000455661 RPS2P15880 293 aaKnown RBP12.15□□□□□ -0.46
PTPRE-204ENST00000455661 THBS4P35443 961 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 UCP2P55851 309 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 FOXK1P85037 733 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 RPUSD3Q6P087 351 aaKnown RBP12.15□□□□□ -0.46
PTPRE-204ENST00000455661 GALNTL5Q7Z4T8 443 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF321PQ8N8H1 164 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 TMEM104Q8NE00 496 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 GAL3ST4Q96RP7 486 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 TBL1XR1Q9BZK7 514 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 BANF2Q9H503 90 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 NPIPA1Q9UND3 350 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 LSM5Q9Y4Y9 91 aaKnown RBP12.15□□□□□ -0.46
PTPRE-204ENST00000455661 FREM3P0C091 2139 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 OR2C1O95371 312 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 RD3LP0DJH9 198 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 HOXA5P20719 270 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 MAS1LP35410 378 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 TMEM50BP56557 158 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 FMODQ06828 376 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 SPEM2Q0P670 501 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 KIAA0141Q14154 515 aaPredicted RBP12.15□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF529Q6P280 563 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 SNIP1Q8TAD8 396 aaKnown RBP12.15□□□□□ -0.46
PTPRE-204ENST00000455661 RELTQ969Z4 430 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 SLAMF6Q96DU3 332 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 ARHGAP5-AS1Q96IT6 56 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 SPACA5Q96QH8 159 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 S100A13Q99584 98 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 WDR77Q9BQA1 342 aaPredicted RBP12.15□□□□□ -0.46
PTPRE-204ENST00000455661 FOXQ1Q9C009 403 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 OR8D2Q9GZM6 311 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 SUSD2Q9UGT4 822 aa12.15□□□□□ -0.46
PTPRE-204ENST00000455661 PTPRSQ13332 1948 aa12.15□□□□□ -0.47
PTPRE-204ENST00000455661 KIR2DS5A0A0G2JLQ3 304 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 A0A0G2JNG1 304 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 KIR2DS3K7RE56 304 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 NPIPB7O75200 414 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 CRTAPO75718 401 aaPredicted RBP12.14□□□□□ -0.47
PTPRE-204ENST00000455661 RAD51DO75771 328 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 SLC34A2O95436 690 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 PRH1P02810 166 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 HLA-DOBP13765 273 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 BCKDHBP21953 392 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 CHATP28329 748 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 SNU13P55769 128 aaKnown RBP12.14□□□□□ -0.47
PTPRE-204ENST00000455661 KIR2DS5Q14953 304 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 C9orf152Q5JTZ5 239 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 C1orf53Q5VUE5 145 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 METTL27Q8N6F8 245 aaPredicted RBP12.14□□□□□ -0.47
PTPRE-204ENST00000455661 SLC37A2Q8TED4 501 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 PTPMT1Q8WUK0 201 aaPredicted RBP12.14□□□□□ -0.47
PTPRE-204ENST00000455661 MESP1Q9BRJ9 268 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 C19orf12Q9NSK7 152 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 TUBD1Q9UJT1 453 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 STRAPQ9Y3F4 350 aaKnown RBP12.14□□□□□ -0.47
PTPRE-204ENST00000455661 ARHGEF17Q96PE2 2063 aaPredicted RBP12.14□□□□□ -0.47
PTPRE-204ENST00000455661 HNRNPA2B1P22626 353 aaKnown RBP12.14□□□□□ -0.47
PTPRE-204ENST00000455661 FCARP24071 287 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 RPS10P46783 165 aaKnown RBP12.14□□□□□ -0.47
PTPRE-204ENST00000455661 CDX1P47902 265 aaPredicted RBP12.14□□□□□ -0.47
PTPRE-204ENST00000455661 DAP3P51398 398 aaKnown RBP12.14□□□□□ -0.47
PTPRE-204ENST00000455661 SLC35A1P78382 337 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 COL19A1Q14993 1142 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 CHRFAM7AQ494W8 412 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 COMMD2Q86X83 199 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 TMEM151BQ8IW70 566 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 SGPP2Q8IWX5 399 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 GPER1Q99527 375 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 SPSB2Q99619 263 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 SCRT1Q9BWW7 348 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 CHRDQ9H2X0 955 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 CUTCQ9NTM9 273 aa12.14□□□□□ -0.47
PTPRE-204ENST00000455661 A0A1W2PQD3 144 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 SCGB1D2O95969 90 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 TNFP01375 233 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 HCKP08631 526 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 ECI1P42126 302 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 OR3A4PP47883 348 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 DHPSP49366 369 aaPredicted RBP12.13□□□□□ -0.47
PTPRE-204ENST00000455661 SUCLG1P53597 346 aaKnown RBP12.13□□□□□ -0.47
PTPRE-204ENST00000455661 TDGQ13569 410 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 CLINT1Q14677 625 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 PPP1R3BQ86XI6 285 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 SFTPA2Q8IWL1 248 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 ASB10Q8WXI3 467 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 OR11A1Q9GZK7 315 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 NRSN2Q9GZP1 204 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 ARV1Q9H2C2 271 aa12.13□□□□□ -0.47
PTPRE-204ENST00000455661 C17orf51A8MQB3 221 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 ALG1L2C9J202 215 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms