RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 RNPEPL1Q9HAU8 725 aa10.02□□□□□ -0.81
USP40-210ENST00000454354 ABCB9Q9NP78 766 aa10.02□□□□□ -0.81
USP40-210ENST00000454354 BRD7Q9NPI1 651 aa10.02□□□□□ -0.81
USP40-210ENST00000454354 TVP23BQ9NYZ1 205 aa10.02□□□□□ -0.81
USP40-210ENST00000454354 PKD1L1Q8TDX9 2849 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 A6NLC8 198 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 ENSAO43768 121 aaKnown RBP10.01□□□□□ -0.81
USP40-210ENST00000454354 PRKYO43930 277 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 CST4P01036 141 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 GRPP07492 148 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 IGHV4-38-2P0DP08 117 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 EGR1P18146 543 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 ACKR3P25106 362 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 CFHR2P36980 270 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 GNALP38405 381 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 UBA52P62987 128 aaKnown RBP10.01□□□□□ -0.81
USP40-210ENST00000454354 ACTG1P63261 375 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 EFNB1P98172 346 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 ROM1Q03395 351 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 GFOD2Q3B7J2 385 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 C11orf91Q3C1V1 193 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 SLX4IPQ5VYV7 408 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 CD276Q5ZPR3 534 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 KDM4DQ6B0I6 523 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 SFRP4Q6FHJ7 346 aaPredicted RBP10.01□□□□□ -0.81
USP40-210ENST00000454354 KCTD18Q6PI47 426 aaPredicted RBP10.01□□□□□ -0.81
USP40-210ENST00000454354 WDR82Q6UXN9 313 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 KRT77Q7Z794 578 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 GALNT4Q8N4A0 578 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 SIGLECL1Q8N7X8 197 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 OR8B12Q8NGG6 310 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 ITFG2Q969R8 447 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 LYZL4Q96KX0 146 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 PAPOLGQ9BWT3 736 aaKnown RBP10.01□□□□□ -0.81
USP40-210ENST00000454354 ZMAT3Q9HA38 289 aaKnown RBP10.01□□□□□ -0.81
USP40-210ENST00000454354 KRT84Q9NSB2 600 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 ERVK-18Q9QC07 812 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 KAAG1Q9UBP8 84 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 LAMP5Q9UJQ1 280 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 RHBDD3Q9Y3P4 386 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 MPC1Q9Y5U8 109 aa10.01□□□□□ -0.81
USP40-210ENST00000454354 TRAV40A0A0B4J280 105 aa10□□□□□ -0.81
USP40-210ENST00000454354 A0A0U1RQV5 110 aa10□□□□□ -0.81
USP40-210ENST00000454354 hCG_1807616A0A1W2PRN6 198 aa10□□□□□ -0.81
USP40-210ENST00000454354 ACOD1A6NK06 481 aa10□□□□□ -0.81
USP40-210ENST00000454354 TMEM210A6NLX4 147 aa10□□□□□ -0.81
USP40-210ENST00000454354 ZAR1LA6NP61 321 aa10□□□□□ -0.81
USP40-210ENST00000454354 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10□□□□□ -0.81
USP40-210ENST00000454354 ADAM20O43506 726 aa10□□□□□ -0.81
USP40-210ENST00000454354 MITFO75030 526 aaPredicted RBP10□□□□□ -0.81
USP40-210ENST00000454354 FCN3O75636 299 aa10□□□□□ -0.81
USP40-210ENST00000454354 FCGR1AP12314 374 aa10□□□□□ -0.81
USP40-210ENST00000454354 MUC1P15941 1255 aaPredicted RBP10□□□□□ -0.81
USP40-210ENST00000454354 FASP25445 335 aa10□□□□□ -0.81
USP40-210ENST00000454354 DCTDP32321 178 aa10□□□□□ -0.81
USP40-210ENST00000454354 CSNK2BP67870 215 aa10□□□□□ -0.81
USP40-210ENST00000454354 IL5RAQ01344 420 aa10□□□□□ -0.81
USP40-210ENST00000454354 FAM76BQ5HYJ3 339 aa10□□□□□ -0.81
USP40-210ENST00000454354 C1orf146Q5VVC0 180 aa10□□□□□ -0.81
USP40-210ENST00000454354 C12orf73Q69YU5 71 aa10□□□□□ -0.81
USP40-210ENST00000454354 C12orf54Q6X4T0 127 aa10□□□□□ -0.81
USP40-210ENST00000454354 BOLLQ8N9W6 283 aaKnown RBP10□□□□□ -0.81
USP40-210ENST00000454354 OR10Z1Q8NGY1 313 aa10□□□□□ -0.81
USP40-210ENST00000454354 C1orf147Q96MC9 270 aaPredicted RBP10□□□□□ -0.81
USP40-210ENST00000454354 ZNF48Q96MX3 618 aaPredicted RBP10□□□□□ -0.81
USP40-210ENST00000454354 TECTBQ96PL2 329 aa10□□□□□ -0.81
USP40-210ENST00000454354 RTL8AQ9BWD3 113 aa10□□□□□ -0.81
USP40-210ENST00000454354 PPP1R3EQ9H7J1 279 aa10□□□□□ -0.81
USP40-210ENST00000454354 SMURF1Q9HCE7 757 aa10□□□□□ -0.81
USP40-210ENST00000454354 FAM206AQ9NX38 181 aa10□□□□□ -0.81
USP40-210ENST00000454354 ENOPH1Q9UHY7 261 aa10□□□□□ -0.81
USP40-210ENST00000454354 AP4S1Q9Y587 144 aa10□□□□□ -0.81
USP40-210ENST00000454354 TMEM14AQ9Y6G1 99 aa10□□□□□ -0.81
USP40-210ENST00000454354 DNAJC9-AS1A6NH13 148 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 ANXA2P2A6NMY6 339 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 PRR32B1ATL7 298 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 SRRM5B3KS81 715 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 G3V2T6 193 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 CLDN34H7C241 214 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 HAX1O00165 279 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 ZNF254O75437 659 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 IGLV3-1P01715 115 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 GYPAP02724 150 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 MRPL3P09001 348 aaKnown RBP9.99□□□□□ -0.81
USP40-210ENST00000454354 PRTN3P24158 256 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 CFPP27918 469 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 EPHA2P29317 976 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 HCCSP53701 268 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 FGF12P61328 243 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 PRDX4Q13162 271 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 AADACL4Q5VUY2 407 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 NXNL2Q5VZ03 156 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 RBMS3Q6XE24 437 aaKnown RBP9.99□□□□□ -0.81
USP40-210ENST00000454354 ZDHHC13Q8IUH4 622 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 ZNF679Q8IYX0 411 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 BCL6BQ8N143 479 aaPredicted RBP9.99□□□□□ -0.81
USP40-210ENST00000454354 TMEM163Q8TC26 289 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 LRRC29Q8WV35 223 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 HPSE2Q8WWQ2 592 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 ASB17Q8WXJ9 295 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms