RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 RD3LP0DJH9 198 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 PGAM1P18669 254 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 CXCR1P25024 350 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 HOXA9P31269 272 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 SSTR5P35346 364 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 CRATP43155 626 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 RGS6P49758 472 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 PPOXP50336 477 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 CKAP4Q07065 602 aaKnown RBP2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 GINS1Q14691 196 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 ZNF530Q6P9A1 599 aaPredicted RBP2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 FAM92BQ6ZTR7 304 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 BOD1L2Q8IYS8 172 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 SLC34A3Q8N130 599 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 GAPTQ8N292 157 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 ZCCHC24Q8N2G6 241 aaKnown RBP2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 LINC00469Q8N7U9 141 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 SUN5Q8TC36 379 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 DCPSQ96C86 337 aaKnown RBP2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 ZFP3Q96NJ6 502 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 TIMM17AQ99595 171 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 COPS4Q9BT78 406 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 PORCNQ9H237 461 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 CHMP4BQ9H444 224 aaKnown RBP2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 C12orf10Q9HB07 376 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 NOX3Q9HBY0 568 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 TMBIM4Q9HC24 238 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 WFDC1Q9HC57 220 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 FAM49BQ9NUQ9 324 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 PRR34Q9NV39 138 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 RHBDL2Q9NX52 303 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 TFR2Q9UP52 801 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 CFL2Q9Y281 166 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 SIGLEC1Q9BZZ2 1709 aa2.78□□□□□ -1.96
HMGN3P1-201ENST00000453847 ZNF646O15015 1829 aaPredicted RBP2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 IGHV5-51A0A0C4DH38 117 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 A0A1B0GUA9 196 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 KRBOX1C9JBD0 128 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 PLPP3O14495 311 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 CALUO43852 315 aaPredicted RBP2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 SHOX2O60902 331 aaPredicted RBP2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 CA11O75493 328 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 HTR1DP28221 377 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 RANBP1P43487 201 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 MAP3K7CLP57077 242 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 OR10A3P58181 314 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 INCA1Q0VD86 236 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 NTM-AS1Q6ZSK4 140 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 AHSA2Q719I0 299 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 SLC7A5P1Q8MH63 180 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 LINC01555Q8NAE3 123 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 OR6N1Q8NGY5 312 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 OR13G1Q8NGZ3 307 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 BLOC1S5Q8TDH9 187 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 RNF138Q8WVD3 245 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 PTX4Q96A99 478 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 SMARCD1Q96GM5 515 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 ZNF514Q96K75 400 aaPredicted RBP2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 TEAD3Q99594 435 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 ANGPTL4Q9BY76 406 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 PARP12Q9H0J9 701 aaKnown RBP2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 RPP21Q9H633 154 aaKnown RBP2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 IFT46Q9NQC8 304 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 SIGLEC7Q9Y286 467 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 FADS3Q9Y5Q0 445 aa2.77□□□□□ -1.97
HMGN3P1-201ENST00000453847 CCL15-CCL14A0A0B4J2E2 113 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 IGKV3D-20A0A0C4DH25 116 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 A0A0U1RQV1 116 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 KIR2DS1A0A191URI9 304 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 CLDN34H7C241 214 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 GOLGA8RI6L899 631 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 TNFRSF11BO00300 401 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 TOR1AO14656 332 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 CDC40O60508 579 aaKnown RBP eCLIP2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 REM1O75628 298 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 SERPINB7O75635 380 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 SLC35G6P0C7Q6 338 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 SYT1P21579 422 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 RPS9P46781 194 aaKnown RBP2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 MTPNP58546 118 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 VSNL1P62760 191 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 SKP1P63208 163 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 CRADDP78560 199 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 CYP24A1Q07973 514 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 C2orf54Q08AI8 447 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 MADCAM1Q13477 382 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 COTL1Q14019 142 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 CCL15Q16663 113 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 C6orf99Q4VX62 202 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 C5orf47Q569G3 176 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 PCP2Q8IVA1 136 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 ZNF584Q8IVC4 421 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 NELFCDQ8IXH7 590 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 C12orf56Q8IXR9 622 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 LGI3Q8N145 548 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 ZNF433Q8N7K0 673 aaPredicted RBP2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 C19orf18Q8NEA5 215 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 OR52P1PQ8NH57 321 aa2.76□□□□□ -1.97
HMGN3P1-201ENST00000453847 RXFP4Q8TDU9 374 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms