RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 BDH1Q02338 343 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF92Q03936 586 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 HLXQ14774 488 aaPredicted RBP7.42□□□□□ -1.22
COL28A1-205ENST00000453441 TP53I3Q53FA7 332 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 TMEM244Q5VVB8 128 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 OR2T2Q6IF00 324 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 LAIR2Q6ISS4 152 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 Q6ZSR3 168 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 AHSA2Q719I0 299 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 DOK3Q7L591 496 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 LHFPL3Q86UP9 236 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 COMMD2Q86X83 199 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 CELF2-AS1Q8N7Q2 184 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 OR2G2Q8NGZ5 317 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 ERGIC1Q969X5 290 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 PELI1Q96FA3 418 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 C4orf36Q96KX1 117 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF649Q9BS31 505 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 TTTY10Q9BZA0 68 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 POFUT1Q9H488 388 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 DUSP21Q9H596 190 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 TRIM36Q9NQ86 728 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 DLL4Q9NR61 685 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 DECR2Q9NUI1 292 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 ACOXLQ9NUZ1 547 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 MYEF2Q9P2K5 600 aaKnown RBP7.42□□□□□ -1.22
COL28A1-205ENST00000453441 IL19Q9UHD0 177 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 GTF2A1LQ9UNN4 478 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 N6AMT1Q9Y5N5 214 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 MPC1Q9Y5U8 109 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 PDZD2O15018 2839 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF816-ZNF321PA0A0X1KG74 233 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 TMEM212A6NML5 194 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 ANXA2P2A6NMY6 339 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 J3QLW9 94 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 RGS10O43665 173 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 XPNPEP2O43895 674 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 FBXO24O75426 580 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 RPP14O95059 124 aaKnown RBP7.41□□□□□ -1.22
COL28A1-205ENST00000453441 PNPP00491 289 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 CST4P01036 141 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 IGHV1-46P01743 117 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 IGHV4-39P01824 125 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 NAT2P11245 290 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF19P17023 458 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 ACHEP22303 614 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 CRHBPP24387 322 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 ETV1P50549 477 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 ART1P52961 327 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 OR12D2P58182 307 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 SLC3A1Q07837 685 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 MFGE8Q08431 387 aaPredicted RBP7.41□□□□□ -1.22
COL28A1-205ENST00000453441 RIPPLY1Q0D2K3 151 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 ALKBH1Q13686 389 aaKnown RBP7.41□□□□□ -1.22
COL28A1-205ENST00000453441 GFOD2Q3B7J2 385 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 WDR38Q5JTN6 314 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 RPL22L1Q6P5R6 122 aaKnown RBP7.41□□□□□ -1.22
COL28A1-205ENST00000453441 CLEC2AQ6UVW9 174 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 PRSS48Q7RTY5 328 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF786Q8N393 782 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 SEMA6DQ8NFY4 1073 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 OR56B2PQ8NGI1 322 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 OR2AE1Q8NHA4 323 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 THRSPQ92748 146 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 RDH5Q92781 318 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 ELMOD3Q96FG2 381 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 PERPQ96FX8 193 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 TECTBQ96PL2 329 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 SORCS2Q96PQ0 1159 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 MND1Q9BWT6 205 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 COMMD4Q9H0A8 199 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 SAP30LQ9HAJ7 183 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 GPR84Q9NQS5 396 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 C14orf119Q9NWQ9 140 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 BABAM2Q9NXR7 383 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 ENPP5Q9UJA9 477 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 SLC22A13Q9Y226 551 aa7.41□□□□□ -1.22
COL28A1-205ENST00000453441 ZSCAN5BA6NJL1 495 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 PTGES3LE9PB15 166 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 MAGEB4O15481 346 aaPredicted RBP7.4□□□□□ -1.22
COL28A1-205ENST00000453441 SYT7O43581 403 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 GATBO75879 557 aaKnown RBP7.4□□□□□ -1.22
COL28A1-205ENST00000453441 CD1AP06126 327 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 DAOP14920 347 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 SLC25A16P16260 332 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 CD200P41217 278 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 CRYBB2P43320 205 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 PDLIM4P50479 330 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 CDH15P55291 814 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 WNT4P56705 351 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 TNFAIP6P98066 277 aaPredicted RBP7.4□□□□□ -1.22
COL28A1-205ENST00000453441 ACSM1Q08AH1 577 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 OR8G1Q15617 311 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 Q5PR19 223 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF676Q8N7Q3 588 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 NANOGP1Q8N7R0 232 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 OR2Z1Q8NG97 314 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 OR51E1Q8TCB6 317 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 MICU1Q9BPX6 476 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 ADAT1Q9BUB4 502 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms