RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 DNM1P46Q6ZS02 220 aa13.31□□□□□ -0.28
VCX3B-204ENST00000453306 MRPL21Q7Z2W9 205 aaKnown RBP13.31□□□□□ -0.28
VCX3B-204ENST00000453306 BHLHE23Q8NDY6 225 aa13.31□□□□□ -0.28
VCX3B-204ENST00000453306 OR51A4Q8NGJ6 313 aa13.31□□□□□ -0.28
VCX3B-204ENST00000453306 PGLYRP3Q96LB9 341 aa13.31□□□□□ -0.28
VCX3B-204ENST00000453306 COG8Q96MW5 612 aa13.31□□□□□ -0.28
VCX3B-204ENST00000453306 SP140LQ9H930 580 aa13.31□□□□□ -0.28
VCX3B-204ENST00000453306 BLOC1S6Q9UL45 172 aa13.31□□□□□ -0.28
VCX3B-204ENST00000453306 ERGIC3Q9Y282 383 aa13.31□□□□□ -0.28
VCX3B-204ENST00000453306 RHBDD3Q9Y3P4 386 aa13.31□□□□□ -0.28
VCX3B-204ENST00000453306 CHD3Q12873 2000 aaKnown RBP13.3□□□□□ -0.28
VCX3B-204ENST00000453306 A8MV72 311 aaPredicted RBP13.3□□□□□ -0.28
VCX3B-204ENST00000453306 MYL12BO14950 172 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 MLNRO43193 412 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 SSX4O60224 188 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 RPS11P62280 158 aaKnown RBP eCLIP13.3□□□□□ -0.28
VCX3B-204ENST00000453306 ACSM1Q08AH1 577 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 CHRFAM7AQ494W8 412 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 DMRTC1Q5HYR2 192 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 RPL22L1Q6P5R6 122 aaKnown RBP13.3□□□□□ -0.28
VCX3B-204ENST00000453306 ZNF773Q6PK81 442 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 CLEC2AQ6UVW9 174 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 KRT74Q7RTS7 529 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 OR13C5Q8NGS8 318 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 TMEM158Q8WZ71 300 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 MRPL48Q96GC5 212 aaKnown RBP13.3□□□□□ -0.28
VCX3B-204ENST00000453306 OPALINQ96PE5 141 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 SLC30A2Q9BRI3 323 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 MND1Q9BWT6 205 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 CACNG6Q9BXT2 260 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 RGCCQ9H4X1 137 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 ZNF696Q9H7X3 374 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 MOB1AQ9H8S9 216 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 V9GYS6 101 aa13.3□□□□□ -0.28
VCX3B-204ENST00000453306 TRBV2A0A0J9YWF9 115 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 PNMA8CA0A1B0GUJ8 204 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 LOC107986453A0A1B0GWG9 222 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 A0A1W2PPW3 197 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 GGT3PA6NGU5 568 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 TRIM64CA6NLI5 447 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 TIMM8AO60220 97 aaPredicted RBP13.29□□□□□ -0.28
VCX3B-204ENST00000453306 MRPS14O60783 128 aaKnown RBP13.29□□□□□ -0.28
VCX3B-204ENST00000453306 LY6HO94772 140 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 INMTO95050 263 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 IGHV1-46P01743 117 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 HLA-DPB1P04440 258 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 ISG15P05161 165 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 SMIM18P0DKX4 95 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 BMP4P12644 408 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 SLC3A1Q07837 685 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 TBCEQ15813 527 aaPredicted RBP13.29□□□□□ -0.28
VCX3B-204ENST00000453306 CCDC58Q4VC31 144 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 ASPHD2Q6ICH7 369 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 OR8G5Q8NG78 346 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 GHSRQ92847 366 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 DVL3Q92997 716 aaPredicted RBP13.29□□□□□ -0.28
VCX3B-204ENST00000453306 SORCS2Q96PQ0 1159 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 TPK1Q9H3S4 243 aa13.29□□□□□ -0.28
VCX3B-204ENST00000453306 FBN1P35555 2871 aaKnown RBP13.28□□□□□ -0.28
VCX3B-204ENST00000453306 LOC390937A0A1W2PQ73 354 aa13.28□□□□□ -0.28
VCX3B-204ENST00000453306 VSTM5A8MXK1 200 aa13.28□□□□□ -0.28
VCX3B-204ENST00000453306 SPRY3O43610 288 aa13.28□□□□□ -0.28
VCX3B-204ENST00000453306 NCR1O76036 304 aa13.28□□□□□ -0.28
VCX3B-204ENST00000453306 FAHP16930 419 aa13.28□□□□□ -0.28
VCX3B-204ENST00000453306 CA6P23280 308 aa13.28□□□□□ -0.28
VCX3B-204ENST00000453306 MRPL28Q13084 256 aaKnown RBP13.28□□□□□ -0.28
VCX3B-204ENST00000453306 INSL4Q14641 139 aa13.28□□□□□ -0.28
VCX3B-204ENST00000453306 MED22Q15528 200 aa13.28□□□□□ -0.28
VCX3B-204ENST00000453306 ADAT3Q96EY9 351 aaPredicted RBP13.28□□□□□ -0.28
VCX3B-204ENST00000453306 CDC42EP3Q9UKI2 254 aa13.28□□□□□ -0.28
VCX3B-204ENST00000453306 C17orf100A8MU93 164 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 M0R233 179 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 SYT7O43581 403 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 PLPP2O43688 288 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 SLC25A16P16260 332 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 CELP19835 753 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 ZNF81P51508 661 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 SNRPD2P62316 118 aaKnown RBP13.27□□□□□ -0.29
VCX3B-204ENST00000453306 TPBGQ13641 420 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 SSX1Q16384 188 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 NKPD1Q17RQ9 610 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 TMEM244Q5VVB8 128 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 UBE2UQ5VVX9 321 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 TMEM42Q69YG0 159 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 DOK3Q7L591 496 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 ZNF676Q8N7Q3 588 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 TSPAN14Q8NG11 270 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 OR10AD1Q8NGE0 317 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 OR5AK2Q8NH90 309 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 SMIM19Q96E16 107 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 NR1H4Q96RI1 486 aaPredicted RBP13.27□□□□□ -0.29
VCX3B-204ENST00000453306 MYCBPQ99417 103 aaPredicted RBP13.27□□□□□ -0.29
VCX3B-204ENST00000453306 MGLLQ99685 303 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 TRIM36Q9NQ86 728 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 GPR160Q9UJ42 338 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 SF3B6Q9Y3B4 125 aaKnown RBP13.27□□□□□ -0.29
VCX3B-204ENST00000453306 NBEAL1Q6ZS30 2694 aa13.27□□□□□ -0.29
VCX3B-204ENST00000453306 MXRA5Q9NR99 2828 aa13.26□□□□□ -0.29
VCX3B-204ENST00000453306 IGHV4-30-2A0A087WSY4 118 aa13.26□□□□□ -0.29
VCX3B-204ENST00000453306 IGHV3-64DA0A0J9YX35 117 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms