RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 KCNIP1Q9NZI2 227 aa3.64□□□□□ -1.83
HMGB3P21-201ENST00000452483 GSKIPQ9P0R6 139 aa3.64□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR51B4Q9Y5P0 310 aa3.64□□□□□ -1.83
HMGB3P21-201ENST00000452483 COX11Q9Y6N1 276 aa3.64□□□□□ -1.83
HMGB3P21-201ENST00000452483 ZBED9Q6R2W3 1325 aa3.64□□□□□ -1.83
HMGB3P21-201ENST00000452483 COL11A2P13942 1736 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P21-201ENST00000452483 ERCC6Q03468 1493 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 IGLV5-45A0A087WSX0 123 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 IGHV2OR16-5A0A0B4J2B6 119 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 A0A0G2JMP0 313 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 ZNF98A6NK75 572 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 B4DXG7 233 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 ZNF878C9JN71 531 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 ZNF587BE7ETH6 402 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 MFNGO00587 321 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 CST8O60676 142 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 PMS2P2O95744 297 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 CYB5R3P00387 301 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 IFNA1P01562 189 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 GIPP09681 153 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 LIFP15018 202 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 MYL12AP19105 171 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 CCR7P32248 378 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 NR4A2P43354 598 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 RORCP51449 518 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 EFNA3P52797 238 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 CRYBA2P53672 197 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 MFAP2P55001 183 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 SNAP25P60880 206 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 FAM53BQ14153 422 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 FASTKQ14296 549 aaKnown RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 LTB4RQ15722 352 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 TAB1Q15750 504 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 CLEC12BQ2HXU8 276 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 FHL5Q5TD97 284 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 HIST2H3PS2Q5TEC6 136 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR2T5Q6IEZ7 315 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 C8orf82Q6P1X6 216 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 TNFAIP8L2Q6P589 184 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 SYCE2Q6PIF2 218 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 C5orf46Q6UWT4 87 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 FAM231DQ6ZW35 169 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 FAM220AQ7Z4H9 259 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 MRPL55Q7Z7F7 128 aaKnown RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 SKA3Q8IX90 412 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 SLC34A3Q8N130 599 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 DAW1Q8N136 415 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 PNKDQ8N490 385 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 GATD1Q8NB37 220 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR2Z1Q8NG97 314 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR4M2Q8NGB6 313 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR10G3Q8NGC4 313 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR52E4Q8NGH9 312 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR13D1Q8NGV5 346 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR13G1Q8NGZ3 307 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR2T29Q8NH02 315 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 NTN5Q8WTR8 489 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 ZNRF4Q8WWF5 429 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 ASB17Q8WXJ9 295 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 SMIM12Q96EX1 92 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 WBP1Q96G27 269 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 PFDN5Q99471 154 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 SEC22CQ9BRL7 303 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 MED18Q9BUE0 208 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 YTHDF1Q9BYJ9 559 aaKnown RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 KLK15Q9H2R5 256 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR51I1Q9H343 314 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 LIME1Q9H400 295 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 NMNAT1Q9HAN9 279 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 TMEM9BQ9NQ34 198 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 EXOSC3Q9NQT5 275 aaKnown RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 BIN3Q9NQY0 253 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR1A1Q9P1Q5 309 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 RIMS3Q9UJD0 308 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 RAB22AQ9UL26 194 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 TRAPPC4Q9Y296 219 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 FAM32AQ9Y421 112 aaKnown RBP3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 SLC22A7Q9Y694 548 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 CACNA1FO60840 1977 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 PCDH11XQ9BZA7 1347 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 NID2Q14112 1375 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 RFX7Q2KHR2 1363 aa3.63□□□□□ -1.83
HMGB3P21-201ENST00000452483 EVPLQ92817 2033 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 A0A1B0GWB2 263 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 A6NDN8 102 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 TRABD2BA6NFA1 517 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 NCBP2LA6PVI3 153 aaKnown RBP3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 PPP5D1E7EU14 171 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 E9PLD3 99 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 BHLHE40O14503 412 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 PHYHO14832 338 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 CHP2O43745 196 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 RP2O75695 350 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 C1QL1O75973 258 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 S1PR2O95136 353 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 TTC4O95801 387 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 HAND1O96004 215 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 LALBAP00709 142 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 IGHV4-39P01824 125 aa3.62□□□□□ -1.83
HMGB3P21-201ENST00000452483 SEMG1P04279 462 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms