RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 NRG4Q8WWG1 115 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 GPR84Q9NQS5 396 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 GTF2A1LQ9UNN4 478 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 RHBDD3Q9Y3P4 386 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 NPTNQ9Y639 398 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 HSPE1-MOB4S4R3N1 261 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-202ENST00000452372 IGHV3-64DA0A0J9YX35 117 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 ATP6V1B1P15313 513 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 IL2RGP31785 369 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 MAP2K3P46734 347 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 MZT1Q08AG7 82 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 HNRNPA0Q13151 305 aaKnown RBP16.8■□□□□ 0.28
COL9A3-202ENST00000452372 SMN1Q16637 294 aaKnown RBP16.8■□□□□ 0.28
COL9A3-202ENST00000452372 TP53I3Q53FA7 332 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 KRT74Q7RTS7 529 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 MOGAT3Q86VF5 341 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 CATSPERDQ86XM0 798 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 ZNF420Q8TAQ5 688 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-202ENST00000452372 RORBQ92753 470 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 DVL3Q92997 716 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-202ENST00000452372 C1orf159Q96HA4 380 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 NARFLQ9H6Q4 476 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 GNG8Q9UK08 70 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 MYRFQ9Y2G1 1151 aa16.8■□□□□ 0.28
COL9A3-202ENST00000452372 LOC100289279A0A1B0GTE1 492 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 H0YJX3 145 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 TMEM178BH3BS89 294 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 FAM20BO75063 409 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 CST4P01036 141 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 IGHA1P01876 353 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 RBMXP38159 391 aaKnown RBP16.79■□□□□ 0.28
COL9A3-202ENST00000452372 GNALP38405 381 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 PMELP40967 661 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 LMO4P61968 165 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 CHRFAM7AQ494W8 412 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 FAM220AQ7Z4H9 259 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 COMMD2Q86X83 199 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 EGFL6Q8IUX8 553 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 CNIH3Q8TBE1 160 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 Q8TCH9 128 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 MSI2Q96DH6 328 aaKnown RBP16.79■□□□□ 0.28
COL9A3-202ENST00000452372 MYCBPQ99417 103 aaPredicted RBP16.79■□□□□ 0.28
COL9A3-202ENST00000452372 INPP5EQ9NRR6 644 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 C14orf119Q9NWQ9 140 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 SLC22A13Q9Y226 551 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 MPC1Q9Y5U8 109 aa16.79■□□□□ 0.28
COL9A3-202ENST00000452372 A0A1B0GTI1 187 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 LRRC30A6NM36 301 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 MTRF1O75570 445 aaKnown RBP16.78■□□□□ 0.28
COL9A3-202ENST00000452372 IGHV2-70P01814 119 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 GNAO1P09471 354 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 OR12D2P58182 307 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 MPPED2Q15777 294 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 PRAMEF6Q5VXH4 476 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 LHFPL3Q86UP9 236 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 SEMA6DQ8NFY4 1073 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 OR52I1Q8NGK6 324 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 OR8S1Q8NH09 359 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 TFAP2CQ92754 450 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 RNF166Q96A37 237 aaPredicted RBP16.78■□□□□ 0.28
COL9A3-202ENST00000452372 MRPL48Q96GC5 212 aaKnown RBP16.78■□□□□ 0.28
COL9A3-202ENST00000452372 FAM71F1Q96KD3 344 aaPredicted RBP16.78■□□□□ 0.28
COL9A3-202ENST00000452372 PAPOLGQ9BWT3 736 aaKnown RBP16.78■□□□□ 0.28
COL9A3-202ENST00000452372 PPP1R3EQ9H7J1 279 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 FGF20Q9NP95 211 aaPredicted RBP16.78■□□□□ 0.28
COL9A3-202ENST00000452372 UFSP2Q9NUQ7 469 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 ACOXLQ9NUZ1 547 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 TMEM160Q9NX00 188 aa16.78■□□□□ 0.28
COL9A3-202ENST00000452372 ZNF816-ZNF321PA0A0X1KG74 233 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 ZNF850A8MQ14 1090 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 DHRS3O75911 302 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 ACTA2P62736 377 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 ACTG2P63267 376 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 RIPPLY1Q0D2K3 151 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 PRDX4Q13162 271 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 RIPK1Q13546 671 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 GALEQ14376 348 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 ZBTB37Q5TC79 503 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 Q6ZSR3 168 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 LRRC28Q86X40 367 aaPredicted RBP16.77■□□□□ 0.28
COL9A3-202ENST00000452372 C8orf59Q8N0T1 100 aaPredicted RBP16.77■□□□□ 0.28
COL9A3-202ENST00000452372 C1orf87Q8N0U7 546 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 OR11L1Q8NGX0 322 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 PIGCQ92535 297 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 ITPKCQ96DU7 683 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 MICU1Q9BPX6 476 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 ZNF649Q9BS31 505 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 FN3KRPQ9HA64 309 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 ABCB9Q9NP78 766 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 ERVK13-1Q9NX77 482 aa16.77■□□□□ 0.28
COL9A3-202ENST00000452372 ANXA2P2A6NMY6 339 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 P2RY10O00398 339 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 CYB5R3P00387 301 aaPredicted RBP16.76■□□□□ 0.27
COL9A3-202ENST00000452372 FAM157CP0CG43 387 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 IRF2P14316 349 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 CCL1P22362 96 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 PSMB10P40306 273 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 CDH15P55291 814 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 BTG1P62324 171 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms