RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 PMPCAQ10713 525 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 C2orf68Q2NKX9 166 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 PHYHD1Q5SRE7 291 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 STEAP1BQ6NZ63 245 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 SLC25A47Q6Q0C1 308 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 OPN5Q6U736 354 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF813Q6ZN06 617 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 ABHD12BQ7Z5M8 362 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 NAA40Q86UY6 237 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 RPS19BP1Q86WX3 136 aaKnown RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 CLEC1AQ8NC01 280 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 OR4S1Q8NGB4 309 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 OR6X1Q8NH79 312 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 GPX8Q8TED1 209 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 FAM71F1Q96KD3 344 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF385AQ96PM9 386 aaKnown RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 URB1O60287 2271 aaKnown RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 CFAP47Q6ZTR5 3102 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 A0A0G2JMM0 328 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 A0A1B0GVI7 797 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 A0A1W2PPB8 328 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 A0A1W2PRS3 328 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 OR2M5A3KFT3 312 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 WIPF3A6NGB9 483 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 KIR3DP1A8MWS1 328 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 ZIC3O60481 467 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 CREBL2O60519 120 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-202ENST00000451716 AKAIN1P0CW23 69 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 RAB4AP20338 218 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 BDKRB2P30411 391 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 OTX2P32243 289 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 FAUP35544 74 aaKnown RBP10.66□□□□□ -0.7
COL27A1-202ENST00000451716 SSR4P51571 173 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF121P58317 390 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-202ENST00000451716 GALNT16Q8N428 558 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 GLYATL2Q8WU03 294 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 CXorf58Q96LI9 332 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 DNTTIP1Q9H147 329 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 KIF25Q9UIL4 384 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 SCP2D1Q9UJQ7 156 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 FARSAQ9Y285 508 aaKnown RBP10.66□□□□□ -0.7
COL27A1-202ENST00000451716 SLC5A6Q9Y289 635 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 HDGFL3Q9Y3E1 203 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 RHBDD3Q9Y3P4 386 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 A0A1B0GTI1 187 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 MEGF11A6BM72 1044 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 E9PLN8 166 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 DUSP3P51452 185 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-202ENST00000451716 PSMA6P60900 246 aaKnown RBP10.66□□□□□ -0.7
COL27A1-202ENST00000451716 EXT1Q16394 746 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 TMEM88Q6PEY1 159 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 LYPD6Q86Y78 171 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 GABRG1Q8N1C3 465 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 GTPBP8Q8N3Z3 284 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-202ENST00000451716 LRRC18Q8N456 261 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 FTMTQ8N4E7 242 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 PAQR4Q8N4S7 273 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-202ENST00000451716 ARRDC1Q8N5I2 433 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 OR8B12Q8NGG6 310 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 PIPOXQ9P0Z9 390 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 WASF3Q9UPY6 502 aa10.66□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF878C9JN71 531 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 SMAD9O15198 467 aaKnown RBP10.65□□□□□ -0.7
COL27A1-202ENST00000451716 LIFP15018 202 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 FOLR3P41439 243 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 UNC119Q13432 240 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 RNF212Q495C1 297 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 SLC22A6Q4U2R8 563 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF626Q68DY1 528 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 FAM57BQ71RH2 274 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 CHST4Q8NCG5 386 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 OR6N1Q8NGY5 312 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 SLC25A43Q8WUT9 341 aaPredicted RBP10.65□□□□□ -0.7
COL27A1-202ENST00000451716 ZBTB8AQ96BR9 441 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 NKX6-2Q9C056 277 aaPredicted RBP10.65□□□□□ -0.7
COL27A1-202ENST00000451716 GPR84Q9NQS5 396 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 SLC17A5Q9NRA2 495 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 TAS2R8Q9NYW2 309 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 LUZP4Q9P127 313 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 DKKL1Q9UK85 242 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 MYO7BQ6PIF6 2116 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 LOC100509620A0A075B734 347 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 TNFSF11O14788 317 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 SMPD2O60906 423 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 GABRA1P14867 456 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 PVALBP20472 110 aaPredicted RBP10.65□□□□□ -0.7
COL27A1-202ENST00000451716 SLC35A1P78382 337 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 CLN3Q13286 438 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 NKPD1Q17RQ9 610 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 C1orf100Q5SVJ3 147 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 PEAR1Q5VY43 1037 aaPredicted RBP10.65□□□□□ -0.7
COL27A1-202ENST00000451716 SLC36A1Q7Z2H8 476 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 GVQW1Q8N7I0 195 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 TMEM105Q8N8V8 129 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 ADPRHL1Q8NDY3 354 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 SFXN2Q96NB2 322 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 ANGPTL4Q9BY76 406 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 PARD6GQ9BYG4 376 aaPredicted RBP10.65□□□□□ -0.7
COL27A1-202ENST00000451716 METTL9Q9H1A3 318 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 OR51B6Q9H340 312 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms