RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 UNC79Q9P2D8 2635 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 hCG_38984A0A1B0GV85 526 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 LOC107986453A0A1B0GWG9 222 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 ZSCAN5BA6NJL1 495 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 M0R233 179 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 GABRPO00591 440 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 LILRA1O75019 489 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 CD2P06729 351 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 NAT2P11245 290 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 PPOXP50336 477 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 MMP15P51511 669 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 FAM3AP98173 230 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 FABP5Q01469 135 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 ODF4Q2M2E3 257 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 Q499Y3 187 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 DOK3Q7L591 496 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 ZCCHC24Q8N2G6 241 aaKnown RBP11.12□□□□□ -0.63
VPS33A-202ENST00000451053 BHLHE23Q8NDY6 225 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 OR51E1Q8TCB6 317 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 TSEN15Q8WW01 171 aaKnown RBP11.12□□□□□ -0.63
VPS33A-202ENST00000451053 PIGTQ969N2 578 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 KCTD7Q96MP8 289 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 CXorf56Q9H5V9 222 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 OPA3Q9H6K4 179 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 MSL2Q9HCI7 577 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 EDARQ9UNE0 448 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 DHDHQ9UQ10 334 aa11.12□□□□□ -0.63
VPS33A-202ENST00000451053 A0A1B0GTI1 187 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 GGT3PA6NGU5 568 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 CD300LBA8K4G0 201 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 IQCF6A8MYZ5 107 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 H3BMQ9 156 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 H7C417 338 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 P2RY10O00398 339 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 SYT7O43581 403 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 NDUFS7O75251 213 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 MTRF1O75570 445 aaKnown RBP11.11□□□□□ -0.63
VPS33A-202ENST00000451053 GPX5O75715 221 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 IGLV3-1P01715 115 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 OCM2P0CE71 109 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 SELEP16581 610 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 CCL1P22362 96 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 GSK3AP49840 483 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 TNK1Q13470 666 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 CTF1Q16619 201 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 MOGQ16653 247 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 ACSM3Q53FZ2 586 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 ZMAT1Q5H9K5 638 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 Q6ZR03 302 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 CEACAM19Q7Z692 300 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 OR8G5Q8NG78 346 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 OR56B2PQ8NGI1 322 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 NINJ1Q92982 152 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 C12orf43Q96C57 262 aaKnown RBP11.11□□□□□ -0.63
VPS33A-202ENST00000451053 SORCS2Q96PQ0 1159 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 VRK1Q99986 396 aaPredicted RBP11.11□□□□□ -0.63
VPS33A-202ENST00000451053 NAA50Q9GZZ1 169 aaKnown RBP11.11□□□□□ -0.63
VPS33A-202ENST00000451053 TPK1Q9H3S4 243 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 GPR84Q9NQS5 396 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 TXNL4BQ9NX01 149 aaKnown RBP11.11□□□□□ -0.63
VPS33A-202ENST00000451053 PMF1-BGLAPU3KQ54 211 aa11.11□□□□□ -0.63
VPS33A-202ENST00000451053 TRBV5-5A0A0J9YX44 114 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 PLSCR5A0PG75 271 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 H3BSH0 61 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 SC5DO75845 299 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 BMP4P12644 408 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 MYL9P24844 172 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 ACKR3P25106 362 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 ZNF81P51508 661 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 RPS11P62280 158 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS33A-202ENST00000451053 LSM3P62310 102 aaKnown RBP11.1□□□□□ -0.63
VPS33A-202ENST00000451053 OR8B8Q15620 311 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 DEFB113Q30KQ7 82 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 FOXB2Q5VYV0 432 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 C22orf42Q6IC83 251 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 UNQ9370/PRO34162Q6UXP9 181 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 USP43Q70EL4 1123 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 RDH10Q8IZV5 341 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 OR13C3Q8NGS6 347 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 RGP1Q92546 391 aaPredicted RBP11.1□□□□□ -0.63
VPS33A-202ENST00000451053 RPL3LQ92901 407 aaKnown RBP11.1□□□□□ -0.63
VPS33A-202ENST00000451053 C10orf35Q96D05 121 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 MBD6Q96DN6 1003 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 FAM71F1Q96KD3 344 aaPredicted RBP11.1□□□□□ -0.63
VPS33A-202ENST00000451053 OR14A2Q96R54 314 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 CENPOQ9BU64 300 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 SLITRK2Q9H156 845 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 PLEKHA1Q9HB21 404 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 ZNF701Q9NV72 531 aaPredicted RBP11.1□□□□□ -0.63
VPS33A-202ENST00000451053 BEX4Q9NWD9 120 aaPredicted RBP11.1□□□□□ -0.63
VPS33A-202ENST00000451053 CKLFQ9UBR5 152 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 GPR160Q9UJ42 338 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 AKAP6Q13023 2319 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 ARFGEF3Q5TH69 2177 aa11.1□□□□□ -0.63
VPS33A-202ENST00000451053 LOC390937A0A1W2PQ73 354 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 C17orf100A8MU93 164 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 H0YL77 283 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 SPRY3O43610 288 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms