RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CHST11Q9NPF2 352 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 VAX2Q9UIW0 290 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 ABT1Q9ULW3 272 aaKnown RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 GPR132Q9UNW8 380 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 TICRRQ7Z2Z1 1910 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 NPIPA5A0A0B4J1W7 369 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 A0A1B0GWA3 101 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 WIPF3A6NGB9 483 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 MANSC4A6NHS7 340 aaPredicted RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 NPIPA7E9PJI5 369 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 ZNF264O43296 627 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 NSA2O95478 260 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 SCGB1D2O95969 90 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 STATHP02808 62 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 PCCBP05166 539 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 SRP19P09132 144 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 NPIPA8P0DM63 369 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 FGF5P12034 268 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 IRF2P14316 349 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 HNF1AP20823 631 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 RPS4Y1P22090 263 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 PSMB5P28074 263 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 HOXC8P31273 242 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 APOBEC1P41238 236 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 CDKN1BP46527 198 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 CLDN6P56747 220 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 POLR2LP62875 67 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 COA6Q5JTJ3 125 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 TPGS2Q68CL5 300 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 ARMC6Q6NXE6 501 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 SLC25A26Q70HW3 274 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 SLC16A14Q7RTX9 510 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 GALNTL5Q7Z4T8 443 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 CDC20BQ86Y33 519 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 FAM185AQ8N0U4 392 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 TMEM156Q8N614 296 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 CSNK1A1LQ8N752 337 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 CHST4Q8NCG5 386 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 OR4X1Q8NH49 305 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 CMBLQ96DG6 245 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 TSSK2Q96PF2 358 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 NRTNQ99748 197 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 AICDAQ9GZX7 198 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 DNAJC4Q9NNZ3 241 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 FLRT3Q9NZU0 649 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 CES1P1Q9UKY3 287 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 PLXNA2O75051 1894 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 SCN10AQ9Y5Y9 1956 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 TCRBV21S2A2A0A5A6 115 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 XKRY2A2RUG3 117 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 B4DEV8 164 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 XKRYO14609 159 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 ARPC3O15145 178 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 LDB3O75112 727 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 ZNF217O75362 1048 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 DIRAS3O95661 229 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 CHRM2P08172 466 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 IL6RP08887 468 aaPredicted RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 SLC35G6P0C7Q6 338 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 FOLR1P15328 257 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 HIST1H1TP22492 207 aaPredicted RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 P2RY1P47900 373 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 RND2P52198 227 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 POLR2HP52434 150 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 PRPS1P60891 318 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 RND3P61587 244 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 SMAD3P84022 425 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 TNP2Q05952 138 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 EGR3Q06889 387 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 LMAN2Q12907 356 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 KCNMB1Q16558 191 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 IAH1Q2TAA2 248 aaPredicted RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 GXYLT1Q4G148 440 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 ALG10BQ5I7T1 473 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 MRPL14Q6P1L8 145 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 C22orf39Q6P5X5 142 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 RSPO2Q6UXX9 243 aaPredicted RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 MRPL41Q8IXM3 137 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 CYB561D1Q8N8Q1 229 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 COX18Q8N8Q8 333 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 OR52N4Q8NGI2 321 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 OR5AR1Q8NGP9 310 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 OR1N1Q8NGS0 311 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 GPR173Q9NS66 373 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 TAS2R4Q9NYW5 299 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 LRFN1Q9P244 771 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 HCSTQ9UBK5 93 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 DHDHQ9UQ10 334 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 ZNF780BQ9Y6R6 833 aa7.66□□□□□ -1.18
LSM5-208ENST00000450169 LAMA2P24043 3122 aaKnown RBP7.66□□□□□ -1.18
LSM5-208ENST00000450169 VWA8A3KMH1 1905 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 TRBV24-1A0A075B6N3 115 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 A6NIZ1 184 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 C4orf47A7E2U8 309 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 A8MXE2 369 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 CLDN34H7C241 214 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 K7N7A8 449 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 GRM6O15303 877 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 ERI3O43414 337 aaKnown RBP7.65□□□□□ -1.18
LSM5-208ENST00000450169 CLEC3AO75596 197 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms