RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 ZNF391Q9UJN7 358 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 LRCH1Q9Y2L9 728 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 TMEM14AQ9Y6G1 99 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 KIR2DS1A0A191URI9 304 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 TMEM269A0A1B0GVZ9 245 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 MAGEB4O15481 346 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 FCN3O75636 299 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 GRPP07492 148 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 ZNF154Q13106 437 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 KLF17Q5JT82 389 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 SLC25A30Q5SVS4 291 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 ZFP1Q6P2D0 407 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 ZNF322Q6U7Q0 402 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 DCDC5Q6ZRR9 648 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 OR1M1Q8NGA1 313 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 OR8J1Q8NGP2 316 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 OR5P3Q8WZ94 311 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 EME1Q96AY2 570 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 NEIL1Q96FI4 390 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 CNN2Q99439 309 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 MNTQ99583 582 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 APOL4Q9BPW4 351 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 RBM4BQ9BQ04 359 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 MROQ9BYG7 248 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 RNPEPL1Q9HAU8 725 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 CLN6Q9NWW5 311 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 H2AFY2Q9P0M6 372 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 MRM2Q9UI43 246 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 MPC1Q9Y5U8 109 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 FBN3Q75N90 2809 aa11.73□□□□□ -0.53
RTFDC1-204ENST00000449062 NBEAL1Q6ZS30 2694 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 EBAG9O00559 213 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 VENTXO95231 258 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 IRF2P14316 349 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 RPS2P15880 293 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 HTR1FP30939 366 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 MZT1Q08AG7 82 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 GFOD2Q3B7J2 385 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 ESCO2Q56NI9 601 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 TEX36Q5VZQ5 186 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 WDR25Q64LD2 544 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 WDR82Q6UXN9 313 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 Q6ZSR3 168 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 SLC35F2Q8IXU6 374 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 TEX29Q8N6K0 151 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 NANPQ8TBE9 248 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 TRUB1Q8WWH5 349 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 RAB40AQ8WXH6 277 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 HRASLS5Q96KN8 279 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 SSBP3Q9BWW4 388 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 PBOV1Q9GZY1 135 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 CTSZQ9UBR2 303 aa11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 WARS2Q9UGM6 360 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 NUFIP1Q9UHK0 495 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-204ENST00000449062 A0A0A6YYJ9 748 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 A0A1B0GTI1 187 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 ZNF850A8MQ14 1090 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 TCF21O43680 179 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 TTRP02766 147 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 EGR1P18146 543 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 AMY2BP19961 511 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 EPHA1P21709 976 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 PITPNBP48739 271 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 CXCR4P61073 352 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 CSNK2BP67870 215 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 MFGE8Q08431 387 aaPredicted RBP11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 PRDX4Q13162 271 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 LIPNQ5VXI9 398 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 SFRP4Q6FHJ7 346 aaPredicted RBP11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 USP43Q70EL4 1123 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 SSX6Q7RTT6 188 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 FAM90A1Q86YD7 464 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 GID4Q8IVV7 300 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 SEMA6DQ8NFY4 1073 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 OR8S1Q8NH09 359 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 HPSE2Q8WWQ2 592 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 RNF166Q96A37 237 aaPredicted RBP11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 SLC29A1Q99808 456 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 RIBC2Q9H4K1 309 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 KAAG1Q9UBP8 84 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 AUP1Q9Y679 476 aa11.71□□□□□ -0.53
RTFDC1-204ENST00000449062 ANK2Q01484 3957 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 IGHV2-70DA0A0C4DH43 119 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 OOEPA6NGQ2 149 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 C22orf46C9J442 243 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 J3QRE1 110 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 EI24O14681 340 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 CDIPTO14735 213 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 NDUFA2O43678 99 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 PPIAL4GP0DN37 164 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 ATP6V1B1P15313 513 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 ALDH3A2P51648 485 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 RIDAP52758 137 aaKnown RBP11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 SNRPGP62308 76 aaKnown RBP11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 IL5RAQ01344 420 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 EGR3Q06889 387 aa11.7□□□□□ -0.54
RTFDC1-204ENST00000449062 TMED1Q13445 227 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms