RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SRP19P09132 144 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 MDKP21741 143 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 RND3P61587 244 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 H3F3AP84243 136 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 MLF2Q15773 248 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 SGPP2Q8IWX5 399 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 NKAIN3Q8N8D7 197 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 ZNF700Q9H0M5 742 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 RCL1Q9Y2P8 373 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 INSL5Q9Y5Q6 135 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 MTCH2Q9Y6C9 303 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 LRRK1Q38SD2 2015 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 ZNF860A6NHJ4 632 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 LATO43561 262 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 MMP7P09237 267 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 LINC00614P0C842 121 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 PGA3P0DJD8 388 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 GNALP38405 381 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 EMP2P54851 167 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 FKBP1BP68106 108 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 RUNX2Q13950 521 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 DCAF10Q5QP82 559 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 KCTD18Q6PI47 426 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 ZNF765Q7L2R6 523 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 GRASPQ7Z6J2 395 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 CYB561D1Q8N8Q1 229 aa8.37□□□□□ -1.07
SYNPO2-204ENST00000448416 CEACAM18A8MTB9 384 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 SPINT1O43278 529 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 LMX1BO60663 402 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 PQBP1O60828 265 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 SCGNO76038 276 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 NSA2O95478 260 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 CSTAP01040 98 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 VSIG8P0DPA2 414 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 PNLIPP16233 465 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 NFATC4Q14934 902 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 OR4N2Q8NGD1 307 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 OR2L8Q8NGY9 312 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 DKKL1Q9UK85 242 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 LIPGQ9Y5X9 500 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 LOC107986453A0A1B0GWG9 222 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 A6NNC1 897 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 E5RGE8 158 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 AMY2BP19961 511 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 LMO1P25800 156 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 CMPK1P30085 196 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 GLO1Q04760 184 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 DMRTA1Q5VZB9 504 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 CATSPERDQ86XM0 798 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 TSPAN32Q96QS1 320 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 OR52A1Q9UKL2 312 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 C14orf166Q9Y224 244 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 NSG2Q9Y328 171 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 EMC9Q9Y3B6 208 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 WSB1Q9Y6I7 421 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 A0A1W2PRU2 124 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 A6NIZ1 184 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 RPLP1P05386 114 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 CT62P0C5K7 136 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 ERVFC1-1P60608 527 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 RAP1BP61224 184 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 PAX5Q02548 391 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 RPL18Q07020 188 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 DPTQ07507 201 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 GAGE1Q13065 139 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 ARFRP1Q13795 201 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 ENPP2Q13822 863 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 ZNF74Q16587 644 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 THEM4Q5T1C6 240 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 AADACL3Q5VUY0 350 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 TMEFF1Q8IYR6 380 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 LRRC75AQ8NAA5 344 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 OR13G1Q8NGZ3 307 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 RCC1LQ96I51 464 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 C5orf34Q96MH7 638 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 NICN1Q9BSH3 213 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 SPHK2Q9NRA0 654 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 SUSD2Q9UGT4 822 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 B3GALT5Q9Y2C3 310 aa8.36□□□□□ -1.07
SYNPO2-204ENST00000448416 TRBV23OR9-2A0A075B6M9 112 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 SOX1O00570 391 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 B3GALT2O43825 422 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 RPS2P15880 293 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 OR1P1Q8NH06 330 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 VN1R3Q9BXE9 311 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 DAPP1Q9UN19 280 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 K7N7A8 449 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 XKRYO14609 159 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 ATXN7O15265 892 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 XRCC2O43543 280 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 FGF17O60258 216 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 NKX2-2O95096 273 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 CHRM2P08172 466 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 OR4A8P0C604 315 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 GABRR1P24046 479 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 HERPUD1Q15011 391 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 PCK2Q16822 640 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 C1QL3Q5VWW1 255 aa8.35□□□□□ -1.07
SYNPO2-204ENST00000448416 CACUL1Q86Y37 369 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms