RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 RAMP1O60894 148 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 RAD51DO75771 328 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 KNG1P01042 644 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 IGHG1P01857 330 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 NXPH1P58417 271 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 BLOC1S1P78537 153 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 GUCA2BQ16661 112 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 TMEM176BQ3YBM2 270 aaPredicted RBP11.41□□□□□ -0.58
SHC1-210ENST00000448116 PRAMEF20Q5VT98 475 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 ANKRD37Q7Z713 158 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 CLRN3Q8NCR9 226 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 PLPP5Q8NEB5 264 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 OR51T1Q8NGJ9 327 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 RRNAD1Q96FB5 475 aaKnown RBP11.41□□□□□ -0.58
SHC1-210ENST00000448116 CPNE2Q96FN4 548 aaPredicted RBP11.41□□□□□ -0.58
SHC1-210ENST00000448116 LIN37Q96GY3 246 aaPredicted RBP11.41□□□□□ -0.58
SHC1-210ENST00000448116 CHRNA10Q9GZZ6 450 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 B3GAT1Q9P2W7 334 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 CDC14BO60729 498 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 SFTPBP07988 381 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 QDPRP09417 244 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 TPT1P13693 172 aaKnown RBP11.41□□□□□ -0.58
SHC1-210ENST00000448116 CSNK2A1P68400 391 aaPredicted RBP11.41□□□□□ -0.58
SHC1-210ENST00000448116 NAA40Q86UY6 237 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 DMRTC2Q8IXT2 367 aaPredicted RBP11.41□□□□□ -0.58
SHC1-210ENST00000448116 CSNK2A3Q8NEV1 391 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 KCNG3Q8TAE7 436 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 RAB33BQ9H082 229 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 ACKR4Q9NPB9 350 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 FER1L5A0AVI2 2057 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 ZNF814B7Z6K7 855 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 F5H5K5 113 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 OR2J2O76002 312 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 CHRM2P08172 466 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 ZNF43P17038 809 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 GLRA1P23415 457 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 CX3CR1P49238 355 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 TMEM50BP56557 158 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 SRSF3P84103 164 aaKnown RBP11.41□□□□□ -0.58
SHC1-210ENST00000448116 SRSF4Q08170 494 aaKnown RBP11.41□□□□□ -0.58
SHC1-210ENST00000448116 NKAIN1Q4KMZ8 207 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 TMEM128Q5BJH2 165 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 THEM4Q5T1C6 240 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 CLEC18BQ6UXF7 455 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 HOGA1Q86XE5 327 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 BAP18Q8IXM2 172 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 OR5AS1Q8N127 324 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 PHYHIPLQ96FC7 376 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 PIK3IP1Q96FE7 263 aa11.41□□□□□ -0.58
SHC1-210ENST00000448116 TMEM218A2RU14 115 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 MSGN1A6NI15 193 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 H0YIZ8 118 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 ATG12O94817 140 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 TIAF1O95411 115 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 HIST1H1DP16402 221 aaKnown RBP11.4□□□□□ -0.58
SHC1-210ENST00000448116 PLEKHN1Q494U1 663 aaPredicted RBP11.4□□□□□ -0.58
SHC1-210ENST00000448116 CCDC157Q569K6 752 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 HAGHLQ6PII5 290 aaPredicted RBP11.4□□□□□ -0.58
SHC1-210ENST00000448116 ZSCAN4Q8NAM6 433 aaPredicted RBP11.4□□□□□ -0.58
SHC1-210ENST00000448116 RNF126Q9BV68 326 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 HRH4Q9H3N8 390 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 C5orf66Q9H5L9 145 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 C5orf63A6NC05 138 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 ABCD4O14678 606 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 SCGNO76038 276 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 WDPCPO95876 746 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 HLA-GP17693 338 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 SERPINA2P20848 420 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 TAS2R31P59538 309 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 AKIRIN2Q53H80 203 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 PUSL1Q8N0Z8 303 aaKnown RBP11.4□□□□□ -0.58
SHC1-210ENST00000448116 SLC25A45Q8N413 288 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 PGAM5Q96HS1 289 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 ZC3H10Q96K80 434 aaKnown RBP11.4□□□□□ -0.58
SHC1-210ENST00000448116 OR6C1Q96RD1 312 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 ZNF701Q9NV72 531 aaPredicted RBP11.4□□□□□ -0.58
SHC1-210ENST00000448116 EHFQ9NZC4 300 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 KLHL13Q9P2N7 655 aa11.4□□□□□ -0.58
SHC1-210ENST00000448116 ZNF705EA8MWA4 302 aaPredicted RBP11.4□□□□□ -0.59
SHC1-210ENST00000448116 AGPAT2O15120 278 aa11.4□□□□□ -0.59
SHC1-210ENST00000448116 BLVRBP30043 206 aaPredicted RBP11.4□□□□□ -0.59
SHC1-210ENST00000448116 GUCA1AP43080 201 aaPredicted RBP11.4□□□□□ -0.59
SHC1-210ENST00000448116 NOXO1Q8NFA2 376 aa11.4□□□□□ -0.59
SHC1-210ENST00000448116 CDC6Q99741 560 aa11.4□□□□□ -0.59
SHC1-210ENST00000448116 URM1Q9BTM9 101 aaKnown RBP11.4□□□□□ -0.59
SHC1-210ENST00000448116 HPF1Q9NWY4 346 aa11.4□□□□□ -0.59
SHC1-210ENST00000448116 OR5AC2Q9NZP5 309 aa11.4□□□□□ -0.59
SHC1-210ENST00000448116 ACTL6AO96019 429 aa11.39□□□□□ -0.59
SHC1-210ENST00000448116 GLB1P16278 677 aa11.39□□□□□ -0.59
SHC1-210ENST00000448116 CYCSP99999 105 aaKnown RBP11.39□□□□□ -0.59
SHC1-210ENST00000448116 FAHD2BQ6P2I3 314 aaPredicted RBP11.39□□□□□ -0.59
SHC1-210ENST00000448116 CBLN2Q8IUK8 224 aa11.39□□□□□ -0.59
SHC1-210ENST00000448116 OR51F2Q8NH61 342 aa11.39□□□□□ -0.59
SHC1-210ENST00000448116 FAHD2AQ96GK7 314 aa11.39□□□□□ -0.59
SHC1-210ENST00000448116 MRPL13Q9BYD1 178 aaKnown RBP11.39□□□□□ -0.59
SHC1-210ENST00000448116 H7C2Y5 167 aa11.39□□□□□ -0.59
SHC1-210ENST00000448116 FOSL2P15408 326 aa11.39□□□□□ -0.59
SHC1-210ENST00000448116 SNU13P55769 128 aaKnown RBP11.39□□□□□ -0.59
SHC1-210ENST00000448116 C1QL2Q7Z5L3 287 aa11.39□□□□□ -0.59
SHC1-210ENST00000448116 POC1BQ8TC44 478 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms