RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TNFSF10P50591 281 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 FOXG1P55316 489 aaPredicted RBP8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 QRFPP83859 136 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 FAPQ12884 760 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 KISS1Q15726 138 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 DEFB109BQ30KR1 87 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 PABPC1L2AQ5JQF8 200 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 RAB12Q6IQ22 244 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 STEAP1BQ6NZ63 245 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 IDO2Q6ZQW0 420 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 FGD2Q7Z6J4 655 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZNF100Q8IYN0 542 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 PNLDC1Q8NA58 520 aaKnown RBP8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 TMEM104Q8NE00 496 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 SEMA6DQ8NFY4 1073 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 OR11H7Q8NGC8 314 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 OR51S1Q8NGJ8 323 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 APH1AQ96BI3 265 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 GINS4Q9BRT9 223 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 NICN1Q9BSH3 213 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 SELENOIQ9C0D9 397 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 C12orf49Q9H741 205 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 ELL3Q9HB65 397 aaPredicted RBP8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 ACKR4Q9NPB9 350 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 MED13Q9UHV7 2174 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 OTOGLQ3ZCN5 2332 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 A0A0A6YYH2 397 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 A6NJ64 397 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 M0QYG6 137 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 RAB27BO00194 218 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 SHOXO15266 292 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 IGLV3-1P01715 115 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 RLN1P04808 185 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 CXCL3P19876 107 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 THBS4P35443 961 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 ACTBP60709 375 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 ACTG1P63261 375 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 LIX1LQ8IVB5 337 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 TCTE3Q8IZS6 198 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 GABRG1Q8N1C3 465 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 SEC22CQ9BRL7 303 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 GPR173Q9NS66 373 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 SPRR3Q9UBC9 169 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 OR6C6A6NF89 314 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 WIPF3A6NGB9 483 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 SULT1C2O00338 296 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 NDUFB6O95139 128 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 RAB3DO95716 219 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 TGM6O95932 706 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 CYB5AP00167 134 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 HLA-HP01893 362 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 CD79AP11912 226 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 CCL2P13500 99 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 AP2S1P53680 142 aaPredicted RBP8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 RAG2P55895 527 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 SOX8P57073 446 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 TAS2R19P59542 299 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZNF260Q3ZCT1 412 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 NUFIP2Q7Z417 695 aaKnown RBP8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 C1QL2Q7Z5L3 287 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 TRAPPC6BQ86SZ2 158 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 RTN4RL2Q86UN3 420 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 SLC51BQ86UW2 128 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 FJX1Q86VR8 437 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 CPEB3Q8NE35 698 aaKnown RBP8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 OR4S1Q8NGB4 309 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 OR10K1Q8NGX5 313 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 PP6455Q8WZ26 134 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 S100A13Q99584 98 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 NARFLQ9H6Q4 476 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZNF69Q9UC07 566 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 LOC400499M0QZD8 3231 aa8.31□□□□□ -1.08
COL6A4P1-201ENST00000446690 FAM230AA0A1W2PPH8 454 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 TMEM14DPA8MWL7 114 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZNF736B4DX44 427 aaPredicted RBP8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 PYCARD-AS1I3L0S3 204 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 SOCS1O15524 211 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 CDC14BO60729 498 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 PLATP00750 562 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 SERPINA2P20848 420 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 ACKR3P25106 362 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 ERP29P30040 261 aaKnown RBP8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 PTGFRP43088 359 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 RNPS1Q15287 305 aaKnown RBP8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 RBMS2Q15434 407 aaKnown RBP8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 CD276Q5ZPR3 534 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 CD163Q86VB7 1156 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZNF584Q8IVC4 421 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 GVQW1Q8N7I0 195 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 NAXEQ8NCW5 288 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 OR10R2Q8NGX6 335 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 KCNG3Q8TAE7 436 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 NUDCD2Q8WVJ2 157 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 TNFAIP8L1Q8WVP5 186 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 AQP3Q92482 292 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 WDYHV1Q96HA8 205 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 TMEM59Q9BXS4 323 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 LINC00470Q9BZP3 86 aa8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 TINAGL1Q9GZM7 467 aaPredicted RBP8.3□□□□□ -1.08
COL6A4P1-201ENST00000446690 CHST5Q9GZS9 411 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms