RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 TCTE3Q8IZS6 198 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 BCL7CQ8WUZ0 217 aaPredicted RBP10.56□□□□□ -0.72
FN1-212ENST00000446046 RNF32Q9H0A6 362 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 SEC14L6B5MCN3 397 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 ALG1L2C9J202 215 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 KCNJ3P48549 501 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 ZXDAP98168 799 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 OR2Y1Q8NGV0 311 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 OR5R1Q8NH85 324 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 CA10Q9NS85 328 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 YBX2Q9Y2T7 364 aaKnown RBP10.56□□□□□ -0.72
FN1-212ENST00000446046 KCNMB2Q9Y691 235 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 DHHO43323 396 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 TMPRSS11DO60235 418 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 S100A8P05109 93 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 PCSK6P29122 969 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 NXPH1P58417 271 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 LINC00299Q6ZSB3 139 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 ZNF441Q8N8Z8 693 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 OR4C3Q8NH37 302 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 DDOQ99489 341 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 TAF9BQ9HBM6 251 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 SLC25A19Q9HC21 320 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 SHANK1Q9Y566 2161 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 MN1Q10571 1320 aaPredicted RBP10.56□□□□□ -0.72
FN1-212ENST00000446046 LGALS7P47929 136 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 SLC17A1Q14916 467 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 OR2A5Q96R48 311 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 PDCD1LG2Q9BQ51 273 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 FOXJ3Q9UPW0 622 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 TIMM9Q9Y5J7 89 aa10.56□□□□□ -0.72
FN1-212ENST00000446046 OR5B21A6NL26 309 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 E5RGE8 158 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 RAB27BO00194 218 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 TXNL1O43396 289 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 COX7A2P2O60397 106 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 CTRB1P17538 263 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 TAF9Q16594 264 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 CTRB2Q6GPI1 263 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 OR8B3Q8NGG8 313 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 CLDN23Q96B33 292 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 OR8B2Q96RD0 313 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 FOXB1Q99853 325 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 IL21Q9HBE4 155 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 NSG2Q9Y328 171 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
FN1-212ENST00000446046 OR5G3P0C626 314 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 ACKR3P25106 362 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 GCAP28676 217 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 CLINT1Q14677 625 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 BHLHA15Q7RTS1 189 aaPredicted RBP10.55□□□□□ -0.72
FN1-212ENST00000446046 RHOXF1Q8NHV9 184 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 ST8SIA2Q92186 375 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 PUS1Q9Y606 427 aaKnown RBP eCLIP10.55□□□□□ -0.72
FN1-212ENST00000446046 AQP7O14520 342 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 RFC3P40938 356 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 BTNL8Q6UX41 500 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 LRRK1Q38SD2 2015 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 TICRRQ7Z2Z1 1910 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 ARPC4-TTLL3A0A0A6YYG9 625 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 CCR9P51686 369 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 CLDN12P56749 244 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 PELI3Q8N2H9 469 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 NHLRC2Q8NBF2 726 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 WDR54Q9H977 334 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 TAS2R5Q9NYW4 299 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 KIF26AQ9ULI4 1882 aaPredicted RBP10.55□□□□□ -0.72
FN1-212ENST00000446046 OR2A25A4D2G3 310 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 CHEK1O14757 476 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 SSSCA1O60232 199 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 COX6B1P14854 86 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 RAC3P60763 192 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 NANOGP1Q8N7R0 232 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 OR2A1Q8NGT9 310 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 TM4SF19Q96DZ7 209 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 GON7Q9BXV9 100 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 TUBG2Q9NRH3 451 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 IGHV5-51A0A0C4DH38 117 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 KRBOX1C9JBD0 128 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 DNASE2O00115 360 aaPredicted RBP10.55□□□□□ -0.72
FN1-212ENST00000446046 OR7C2O60412 319 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 AGFG2O95081 481 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 ORM1P02763 201 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 KRTCAP3Q53RY4 240 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 SLC25A26Q70HW3 274 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 SUMF1Q8NBK3 374 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 GREB1LQ9C091 1923 aaPredicted RBP10.55□□□□□ -0.72
FN1-212ENST00000446046 PPM1DO15297 605 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 PPP1CBP62140 327 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 TMEM104Q8NE00 496 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 CT55Q8WUE5 264 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 ALKBH3Q96Q83 286 aaPredicted RBP10.55□□□□□ -0.72
FN1-212ENST00000446046 METTL17Q9H7H0 456 aaPredicted RBP10.55□□□□□ -0.72
FN1-212ENST00000446046 TCFL5Q9UL49 500 aa10.55□□□□□ -0.72
FN1-212ENST00000446046 PCYT1BQ9Y5K3 369 aaPredicted RBP10.55□□□□□ -0.72
FN1-212ENST00000446046 SDCBPO00560 298 aaPredicted RBP10.54□□□□□ -0.72
FN1-212ENST00000446046 FGF2P09038 288 aa10.54□□□□□ -0.72
FN1-212ENST00000446046 SLC25A1P53007 311 aa10.54□□□□□ -0.72
FN1-212ENST00000446046 LAX1Q8IWV1 398 aa10.54□□□□□ -0.72
FN1-212ENST00000446046 ZNF439Q8NDP4 499 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms