RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 OR5AC2Q9NZP5 309 aa10.54□□□□□ -0.72
MSH6-204ENST00000445503 PHF3Q92576 2039 aaKnown RBP10.54□□□□□ -0.72
MSH6-204ENST00000445503 SIGLEC6O43699 453 aa10.54□□□□□ -0.72
MSH6-204ENST00000445503 CPT2P23786 658 aa10.54□□□□□ -0.72
MSH6-204ENST00000445503 FOXK1P85037 733 aa10.54□□□□□ -0.72
MSH6-204ENST00000445503 MISPQ8IVT2 679 aa10.54□□□□□ -0.72
MSH6-204ENST00000445503 ST8SIA1Q92185 356 aa10.54□□□□□ -0.72
MSH6-204ENST00000445503 MR1Q95460 341 aa10.54□□□□□ -0.72
MSH6-204ENST00000445503 PIK3IP1Q96FE7 263 aa10.54□□□□□ -0.72
MSH6-204ENST00000445503 G6PC2Q9NQR9 355 aa10.54□□□□□ -0.72
MSH6-204ENST00000445503 MS4A18H0YCH9 400 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 TSPAN2O60636 221 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 GUSBP08236 651 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 GLP1RP43220 463 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 ASCL1P50553 236 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 MS4A18Q3C1V0 323 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 ACTBL2Q562R1 376 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 PGAP1Q75T13 922 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 ASB13Q8WXK3 278 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 AKR1E2Q96JD6 320 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 UTP23Q9BRU9 249 aaKnown RBP10.53□□□□□ -0.72
MSH6-204ENST00000445503 TLNRD1Q9H1K6 362 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 ALKBH4Q9NXW9 302 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 CLEC1BQ9P126 229 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 RP1L1Q8IWN7 2480 aaPredicted RBP10.53□□□□□ -0.72
MSH6-204ENST00000445503 RNF222A6NCQ9 220 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 LMO7DNF2Z398 122 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 TP53I11O14683 189 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 CDC14BO60729 498 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 NXPH3O95157 252 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 RCC1P18754 421 aaPredicted RBP10.53□□□□□ -0.72
MSH6-204ENST00000445503 RPL12P30050 165 aaKnown RBP10.53□□□□□ -0.72
MSH6-204ENST00000445503 VAMP2P63027 116 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 MFAP5Q13361 173 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 UNC119Q13432 240 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 THEM4Q5T1C6 240 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 C6orf201Q7Z4U5 140 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 CPEB2Q7Z5Q1 589 aaKnown RBP10.53□□□□□ -0.72
MSH6-204ENST00000445503 ESX1Q8N693 406 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 LIPHQ8WWY8 451 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 C2orf50Q96LR7 162 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 MPTX1A8MV57 137 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 DNASE2O00115 360 aaPredicted RBP10.53□□□□□ -0.72
MSH6-204ENST00000445503 SGCEO43556 437 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 IFNA2P01563 188 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 RGS19P49795 217 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 FNDC7Q5VTL7 733 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 OR5L1Q8NGL2 311 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 RNF133Q8WVZ7 376 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 ULBP2Q9BZM5 246 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 C1orf123Q9NWV4 160 aa10.53□□□□□ -0.72
MSH6-204ENST00000445503 IGHV1OR21-1A0A087WYE8 117 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 ANKUB1A6NFN9 424 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 SFT2D2O95562 160 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 CBX5P45973 191 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 KCNJ3P48549 501 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 ZNF84P51523 738 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 CLINT1Q14677 625 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 DOK3Q7L591 496 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 LDLRAD3Q86YD5 345 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 RPS4Y2Q8TD47 263 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 MVB12AQ96EY5 273 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 PHYHIPLQ96FC7 376 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 BORCS8Q96FH0 119 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 MED9Q9NWA0 146 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 WIF1Q9Y5W5 379 aa10.52□□□□□ -0.72
MSH6-204ENST00000445503 CFIP05156 583 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 SLC25A4P12235 298 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 MMP16P51512 607 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 PPA1Q15181 289 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 KISS1Q15726 138 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 IGSF11Q5DX21 431 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 ADAM5Q6NVV9 412 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 MOB3CQ70IA8 216 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 RNF144BQ7Z419 303 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 RNF166Q96A37 237 aaPredicted RBP10.52□□□□□ -0.73
MSH6-204ENST00000445503 ZFP57Q9NU63 452 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 NDRG3Q9UGV2 375 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 SRPK3Q9UPE1 567 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 PUS1Q9Y606 427 aaKnown RBP eCLIP10.52□□□□□ -0.73
MSH6-204ENST00000445503 MSGN1A6NI15 193 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 RNASEK-C17orf49H0YIS7 233 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 IGKV3-11P04433 115 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 GSTP1P09211 210 aaKnown RBP10.52□□□□□ -0.73
MSH6-204ENST00000445503 ID4P47928 161 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 NPBWR1P48145 328 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 PJVKQ0ZLH3 352 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 FDX2Q6P4F2 183 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 DEGS2Q6QHC5 323 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.52□□□□□ -0.73
MSH6-204ENST00000445503 NAA40Q86UY6 237 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 AQP3Q92482 292 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 UQCC1Q9NVA1 299 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 C19orf25Q9UFG5 118 aaPredicted RBP10.52□□□□□ -0.73
MSH6-204ENST00000445503 PURGQ9UJV8 347 aaKnown RBP10.52□□□□□ -0.73
MSH6-204ENST00000445503 FBXO7Q9Y3I1 522 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 ZNF175Q9Y473 711 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 CLDN16Q9Y5I7 305 aa10.52□□□□□ -0.73
MSH6-204ENST00000445503 KIF26AQ9ULI4 1882 aaPredicted RBP10.52□□□□□ -0.73
MSH6-204ENST00000445503 OR5H15A6NDH6 313 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms