RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 C12orf54Q6X4T0 127 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 ZNF557Q8N988 423 aaPredicted RBP3.64□□□□□ -1.83
VPS50-206ENST00000443443 OR51D1Q8NGF3 324 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 OR56B4Q8NH76 319 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 CRYGNQ8WXF5 182 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 RERGQ96A58 199 aaPredicted RBP3.64□□□□□ -1.83
VPS50-206ENST00000443443 CNRIP1Q96F85 164 aaPredicted RBP3.64□□□□□ -1.83
VPS50-206ENST00000443443 SDHCQ99643 169 aaPredicted RBP3.64□□□□□ -1.83
VPS50-206ENST00000443443 RARRES2Q99969 163 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 DHRS9Q9BPW9 319 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 NMUR2Q9GZQ4 415 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 HOXD1Q9GZZ0 328 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 OR51B5Q9H339 312 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 RHOFQ9HBH0 211 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 EXOSC3Q9NQT5 275 aaKnown RBP3.64□□□□□ -1.83
VPS50-206ENST00000443443 INIPQ9NRY2 104 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 PARVAQ9NVD7 372 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 FAM206AQ9NX38 181 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 CMTM6Q9NX76 183 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 TINCRA0A1B0GVN0 87 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 ICOSLGO75144 302 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 AQP8O94778 261 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 CNIH1O95406 144 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 HPRT1P00492 218 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 LALBAP00709 142 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 IFNA21P01568 189 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 IGKV3-15P01624 115 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 CD55P08174 381 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 CD1DP15813 335 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 TCP1P17987 556 aaKnown RBP3.63□□□□□ -1.83
VPS50-206ENST00000443443 GLP1RP43220 463 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 BTDP43251 543 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 MFAP2P55001 183 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 OR12D2P58182 307 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 ERVPABLB-1P60509 514 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 RPL18AQ02543 176 aaKnown RBP3.63□□□□□ -1.83
VPS50-206ENST00000443443 ACVR1Q04771 509 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 PUDPQ08623 228 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 TWF1Q12792 350 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 CLINT1Q14677 625 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 PARP15Q460N3 678 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 CCDC58Q4VC31 144 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 VAX1Q5SQQ9 334 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 OLFML2AQ68BL7 652 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 CASP12Q6UXS9 341 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 GDPGP1Q6ZNW5 385 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 Q6ZR54 194 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 TMEM179Q6ZVK1 233 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 TMEM135Q86UB9 458 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 ZNF584Q8IVC4 421 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 PIANPQ8IYJ0 282 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 FTMTQ8N4E7 242 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 C12orf29Q8N999 325 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 OR4K17Q8NGC6 315 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 OR10Z1Q8NGY1 313 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 ZNF564Q8TBZ8 553 aaPredicted RBP3.63□□□□□ -1.83
VPS50-206ENST00000443443 C16orf78Q8WTQ4 265 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 TMEM234Q8WY98 164 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 ARPC1AQ92747 370 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 MRAP2Q96G30 205 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 RMND5BQ96G75 393 aaPredicted RBP3.63□□□□□ -1.83
VPS50-206ENST00000443443 CEP170P1Q96L14 293 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 HOPXQ9BPY8 73 aaPredicted RBP3.63□□□□□ -1.83
VPS50-206ENST00000443443 DDA1Q9BW61 102 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 OSBPL11Q9BXB4 747 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 HCAR1Q9BXC0 346 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 PCBD2Q9H0N5 130 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 PRORYQ9H606 182 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 KCNIP1Q9NZI2 227 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 GINS2Q9Y248 185 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 KLF12Q9Y4X4 402 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 FANCIQ9NVI1 1328 aa3.63□□□□□ -1.83
VPS50-206ENST00000443443 PBRM1Q86U86 1689 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 IGLV3-22A0A075B6J6 115 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 LOC100131303A0A0U1RQF7 123 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 DAPL1A0PJW8 107 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 TRABD2BA6NFA1 517 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 EFCAB10A6NFE3 127 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 IGLON5A6NGN9 336 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 A6NIZ1 184 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 ZNF233A6NK53 670 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 A8MU10 97 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 DISC1C4P0D8 188 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 M0R1B8 84 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 AZIN1O14977 448 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 UBDO15205 165 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 STX10O60499 249 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 CTNSO60931 367 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 UGT2B11O75310 529 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 SLC2A10O95528 541 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 CD8AP01732 235 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 CD5P06127 495 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 GRPRP30550 384 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 IFNGR2P38484 337 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 SULT1A1P50225 295 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 SULT1A2P50226 295 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 LIM2P55344 173 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 ARG2P78540 354 aa3.62□□□□□ -1.83
VPS50-206ENST00000443443 TFAMQ00059 246 aaKnown RBP3.62□□□□□ -1.83
VPS50-206ENST00000443443 SLC25A11Q02978 314 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms