RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 DAPL1A0PJW8 107 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 TSPAN11A1L157 253 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 MEIS3P1A6NDR6 274 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 NPEPPSL1A6NEC2 478 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 C2CD4BA6NLJ0 364 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ZAR1LA6NP61 321 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 IDSB3KWA1 339 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 M0R3H8 397 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 CCL22O00626 93 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 PDE6DO43924 150 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 CLDN11O75508 207 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 PMS2P2O95744 297 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 LIPFP07098 398 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 NBEAP1P0C6P0 100 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 TDGF1P13385 188 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ST6GAL1P15907 406 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 AKR1C4P17516 323 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 GRK6P43250 576 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 TSFMP43897 325 aaKnown RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 AGTR2P50052 363 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 GEMP55040 296 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 SLC6A3Q01959 620 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 FZD5Q13467 585 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ENDOGQ14249 297 aaKnown RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 LASP1Q14847 261 aaKnown RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 C2orf68Q2NKX9 166 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 SNAI3Q3KNW1 292 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 TMEM177Q53S58 311 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 XKR6Q5GH73 641 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 CLEC12AQ5QGZ9 265 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 FAM27D1Q5T7N8 215 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 FAM69BQ5VUD6 431 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 NCBP2-AS2Q69YL0 99 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 AWAT2Q6E213 333 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 MRM1Q6IN84 353 aaKnown RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 PODNL1Q6PEZ8 512 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 SHISA2Q6UWI4 295 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 LCTLQ6UWM7 567 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 TMEM182Q6ZP80 229 aaPredicted RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 MED25Q71SY5 747 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 FAM220AQ7Z4H9 259 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 SYT9Q86SS6 491 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 GALNT16Q8N428 558 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 OR51G2Q8NGK0 314 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ADAMTS18Q8TE60 1221 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 TMEM174Q8WUU8 243 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 SMPDL3BQ92485 455 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 FGF11Q92914 225 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 TSACCQ96A04 125 aaPredicted RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 PIK3IP1Q96FE7 263 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 SLC35G5Q96KT7 338 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 OR5B2Q96R09 309 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ATP6V0BQ99437 205 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ZFYVE21Q9BQ24 234 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 PCGF1Q9BSM1 259 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 SMIM3Q9BZL3 60 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 HAPLN2Q9GZV7 340 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 APMAPQ9HDC9 416 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 SLC2A8Q9NY64 477 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 SLC25A37Q9NYZ2 338 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 C19orf53Q9UNZ5 99 aaPredicted RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 FOXJ3Q9UPW0 622 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 PPIAL4AQ9Y536 164 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 FLVCR1Q9Y5Y0 555 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ENPP4Q9Y6X5 453 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 A0A1W2PS29 197 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TRBC2A0A5B9 178 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 J3KTA2 159 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 K7EQM0 130 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SOCS6O14544 535 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 EIF1AYO14602 144 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 ZNHIT1O43257 154 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TRAF3IP2O43734 574 aaPredicted RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 LEFTY1O75610 366 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PSMD10O75832 226 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 GASTP01350 101 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TTRP02766 147 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CD74P04233 296 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 AMY2AP04746 511 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CD5P06127 495 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR8U9P0C7N5 309 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 AKAIN1P0CW23 69 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PET100P0DJ07 73 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ACP2P11117 423 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CEACAM1P13688 526 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 UCP1P25874 307 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CD1CP29017 333 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 IMPA1P29218 277 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 EPHA8P29322 1005 aaPredicted RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 NTSR1P30989 418 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CEACAM3P40198 252 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 NSG1P42857 185 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 DUSP3P51452 185 aaPredicted RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 SCAND1P57086 179 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SNRPGP62308 76 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 RPS24P62847 133 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 HERV-K104P63124 156 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 IL24Q13007 206 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 NFATC2Q13469 925 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CBFBQ13951 182 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms