RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 EIF4E3Q8N5X7 224 aaKnown RBP6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR9K2Q8NGE7 335 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR4K13Q8NH42 304 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 MFSD8Q8NHS3 518 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 OIT3Q8WWZ8 545 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 RASD2Q96D21 266 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 MOGAT1Q96PD6 335 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 TMUB1Q9BVT8 246 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 PRDM14Q9GZV8 571 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 HDHD2Q9H0R4 259 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 LIN7BQ9HAP6 207 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 NUP50Q9UKX7 468 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF281Q9Y2X9 895 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 HIVEP2P31629 2446 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 USP9YO00507 2555 aaPredicted RBP6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 SPENQ96T58 3664 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 A0A1W2PPK0 400 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 A6NIZ1 184 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 A6NLC8 198 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 SNRPGP15A8MWD9 76 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 A8MXE2 369 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 MCRIP1C9JLW8 97 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 DHFRP00374 187 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 PTHLHP12272 177 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 TNFSF4P23510 183 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 GNALP38405 381 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 RAP1BP61224 184 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 RAP1AP62834 184 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 ERVK-25P63136 954 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 CLEC2AQ6UVW9 174 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF227Q86WZ6 799 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 S100PBPQ96BU1 408 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 PRSS50Q9UI38 385 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 HRH3Q9Y5N1 445 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 ARPC4-TTLL3A0A0A6YYG9 625 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 PRAF2O60831 178 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 B3GALNT1O75752 331 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF735P0CB33 412 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 IRF2P14316 349 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 B4GALT1P15291 398 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 AGAP20933 346 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 CDK2P24941 298 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 GRNP28799 593 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 PSMB10P40306 273 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 VEGFCP49767 419 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 LY6G6FQ5SQ64 297 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 NHLRC1Q6VVB1 395 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 LINGO2Q7L985 606 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 NUFIP2Q7Z417 695 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 BOLLQ8N9W6 283 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR51A4Q8NGJ6 313 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR10AC1Q8NH08 325 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 KTI12Q96EK9 354 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 AMELYQ99218 206 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 DECR2Q9NUI1 292 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 NKIRAS2Q9NYR9 191 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 RCE1Q9Y256 329 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 MRPS18CQ9Y3D5 142 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 DOPEY1Q5JWR5 2465 aa6.46□□□□□ -1.38
CDC42BPA-208ENST00000442054 NAP1L6A6NFF2 107 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF208O43345 1280 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 NPIPB7O75200 414 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 ALDOBP05062 364 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 NMBP08949 121 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 GIPP09681 153 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 HSD11B1P28845 292 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 DCTDP32321 178 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 EFNB2P52799 333 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 PCBD1P61457 104 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 SNTB2Q13425 540 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 HYAL4Q2M3T9 481 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 SLC16A9Q7RTY1 509 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR4D10Q8NGI6 311 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 CITED4Q96RK1 184 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 PTDSS2Q9BVG9 487 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 METTL17Q9H7H0 456 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MOKQ9UQ07 419 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MTORP42345 2549 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 TRAV14DV4A0A0A6YYC5 116 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 TRBV2A0A0J9YWF9 115 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MBD3L4A6NDZ8 208 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MBD3L3A6NE82 208 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MBD3L5A6NJ08 208 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 ACOD1A6NK06 481 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 HMSDA8MTL9 139 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 FAM25EA8MYX2 175 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 H7C417 338 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 SCO1O75880 301 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 ARL6IP5O75915 188 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 FGF2P09038 288 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 ALOX5APP20292 161 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 PTAFRP25105 342 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MPGP29372 298 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 TSPO2Q5TGU0 170 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 TFAP2EQ6VUC0 442 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 SSX8Q7RTT4 187 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 OVCH2Q7RTZ1 564 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR6V1Q8N148 313 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 FADS6Q8N9I5 356 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms