RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 G3V3Y1 287 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 M0R135 149 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 ARPC1BO15143 372 aaKnown RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 WDPCPO95876 746 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 CHRM2P08172 466 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 GSTP1P09211 210 aaKnown RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 TMIGD3P0DMS9 266 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 GTF2F2P13984 249 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 C4BPBP20851 252 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 MPZP25189 248 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 CDAP32320 146 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF93P35789 620 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 ALDH3B1P43353 468 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 VEGFCP49767 419 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 EFNB2P52799 333 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 NKX2-5P52952 324 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 RRADP55042 308 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 GFRA1P56159 465 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 CARD18P57730 90 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 FCN2Q15485 313 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 SGCAQ16586 387 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 OTPQ5XKR4 325 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 B3GNTL1Q67FW5 361 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 AWAT2Q6E213 333 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 RTL6Q6ICC9 239 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF584Q8IVC4 421 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 MEIOBQ8N635 442 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 OR2M7Q8NG81 312 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 OR13C9Q8NGT0 318 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 OR10D3Q8NH80 312 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 KCNG3Q8TAE7 436 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 PSMF1Q92530 271 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 GCDHQ92947 438 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 RELTQ969Z4 430 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 FGGYQ96C11 551 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 ADAT3Q96EY9 351 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF799Q96GE5 643 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 TECTBQ96PL2 329 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF385AQ96PM9 386 aaKnown RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 UCN2Q96RP3 112 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 SLC25A21Q9BQT8 299 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 LINC00470Q9BZP3 86 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 CHST5Q9GZS9 411 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 TP63Q9H3D4 680 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 MYOZ1Q9NP98 299 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 TMEM38BQ9NVV0 291 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 SLC2A8Q9NY64 477 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 KLK11Q9UBX7 282 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 CGGBP1Q9UFW8 167 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-209ENST00000440653 V9GYS6 101 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 DOCK10Q96BY6 2186 aa8.02□□□□□ -1.13
HDAC6-209ENST00000440653 PRRC2CQ9Y520 2896 aaKnown RBP8.01□□□□□ -1.13
HDAC6-209ENST00000440653 DCHS2Q6V1P9 2916 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 TMEM14DPA8MWL7 114 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 H3BSH0 61 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 RER1O15258 196 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 NKX2-8O15522 239 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 SGCEO43556 437 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 GMDSO60547 372 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 ICMTO60725 284 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 KDM4BO94953 1096 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 FARS2O95363 451 aaKnown RBP8.01□□□□□ -1.13
HDAC6-209ENST00000440653 OPN1LWP04000 364 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 CD74P04233 296 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 HCKP08631 526 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 GIPP09681 153 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-209ENST00000440653 ITGA3P26006 1051 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 CD96P40200 585 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 CBX5P45973 191 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 SLC6A9P48067 706 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 SELENOPP49908 381 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 PRKXP51817 358 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 GALK2Q01415 458 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 FOXO1Q12778 655 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 CNN3Q15417 329 aaKnown RBP8.01□□□□□ -1.13
HDAC6-209ENST00000440653 HYAL4Q2M3T9 481 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF626Q68DY1 528 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 STEAP1BQ6NZ63 245 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 FAM57BQ71RH2 274 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF767PQ75MW2 155 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF627Q7L945 461 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 AAED1Q7RTV5 226 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 YRDCQ86U90 279 aaKnown RBP8.01□□□□□ -1.13
HDAC6-209ENST00000440653 GABRG1Q8N1C3 465 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 ZIC4Q8N9L1 334 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 OR4D6Q8NGJ1 314 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 AQP3Q92482 292 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 SPSB1Q96BD6 273 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 RADILQ96JH8 1075 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 LURAP1Q96LR2 239 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 MDFIQ99750 246 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 PRRT1Q99946 306 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 GINS4Q9BRT9 223 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 URM1Q9BTM9 101 aaKnown RBP8.01□□□□□ -1.13
HDAC6-209ENST00000440653 BEX2Q9BXY8 128 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 EXO5Q9H790 373 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 CNTD2Q9H8S5 307 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 RNF122Q9H9V4 155 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 NOX3Q9HBY0 568 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 PLEK2Q9NYT0 353 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms