RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 RHBDD3Q9Y3P4 386 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 ZNF879B4DU55 563 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 FKBP6O75344 327 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 TIPRLO75663 272 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 SFTPBP07988 381 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 SLC2A5P22732 501 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 CFHR2P36980 270 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 BPIFB3P59826 476 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 CSNK2BP67870 215 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 CBX1P83916 185 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 GFOD2Q3B7J2 385 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 SLC35D3Q5M8T2 416 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 WDR82Q6UXN9 313 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 BRD3OSQ6XYD6 125 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 BBS1Q8NFJ9 593 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 SGMS2Q8NHU3 365 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 THEM6Q8WUY1 208 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 LRRC29Q8WV35 223 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 ZNF747Q9BV97 191 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 TLNRD1Q9H1K6 362 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 YY1AP1Q9H869 796 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 SLC25A19Q9HC21 320 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 FAM53CQ9NYF3 392 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 POMPQ9Y244 141 aa16.83■□□□□ 0.28
NCKIPSD-206ENST00000439518 IGHV3OR15-7A0A075B7D8 119 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 MDFIC2A0A1B0GVS7 189 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 P2RY10O00398 339 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 ALOX5APP20292 161 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 ACKR3P25106 362 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 GNALP38405 381 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 POU4F2Q12837 409 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 DEFB112Q30KQ8 113 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 C11orf91Q3C1V1 193 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 GPR157Q5UAW9 335 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 TMEM236Q5W0B7 351 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 GALNT4Q8N4A0 578 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 ITPKCQ96DU7 683 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 TBX15Q96SF7 602 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 PCGF1Q9BSM1 259 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 PAPOLGQ9BWT3 736 aaKnown RBP16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 PCDHGB1Q9Y5G3 927 aa16.82■□□□□ 0.28
NCKIPSD-206ENST00000439518 DVL1O14640 695 aa16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 MUC1P15941 1255 aaPredicted RBP16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 NAA10P41227 235 aaPredicted RBP16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 PSMA6P60900 246 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 IL5RAQ01344 420 aa16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 SNCBQ16143 134 aa16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 PNLDC1Q8NA58 520 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 BCAS4Q8TDM0 211 aa16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 LYZL4Q96KX0 146 aa16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 WDFY2Q96P53 400 aa16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 NIPAL2Q9H841 368 aa16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 MPC1Q9Y5U8 109 aa16.81■□□□□ 0.28
NCKIPSD-206ENST00000439518 TMPRSS2O15393 492 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 TOX4O94842 621 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 ECDO95905 644 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 CST4P01036 141 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 ELF3P78545 371 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 MICBQ29980 383 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 FAHD1Q6P587 224 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 BTN2A1Q7KYR7 527 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 FTMTQ8N4E7 242 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 DNAJC9Q8WXX5 260 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 OR5P3Q8WZ94 311 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 NRBF2Q96F24 287 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 MICU1Q9BPX6 476 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 YIPF3Q9GZM5 350 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 SIRPDQ9H106 197 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 ZNF391Q9UJN7 358 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 LRP12Q9Y561 859 aa16.8■□□□□ 0.28
NCKIPSD-206ENST00000439518 CENPVL3A0A0U1RRI6 287 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 ANXA2P2A6NMY6 339 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 SRRM5B3KS81 715 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 CDIPTO14735 213 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 HOXA3O43365 443 aaPredicted RBP16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 DNAJC8O75937 253 aaPredicted RBP16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 HCCSP53701 268 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 RPS7P62081 194 aaKnown RBP16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 PRDX4Q13162 271 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 APOFQ13790 326 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 FAM76BQ5HYJ3 339 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 WDR38Q5JTN6 314 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 OR8B12Q8NGG6 310 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 C12orf43Q96C57 262 aaKnown RBP16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 SEH1LQ96EE3 360 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 TEAD3Q99594 435 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 CCL13Q99616 98 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 RTL8AQ9BWD3 113 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 TEX12Q9BXU0 123 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 ABCB9Q9NP78 766 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 RPUSD1Q9UJJ7 312 aaKnown RBP16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 LAMP5Q9UJQ1 280 aa16.79■□□□□ 0.28
NCKIPSD-206ENST00000439518 A0A1B0GW55 424 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 ZNF850A8MQ14 1090 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 SPRY1O43609 319 aaPredicted RBP16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 DUX4L2P0CJ85 424 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 DUX4L3P0CJ86 424 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 DUX4L4P0CJ87 422 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms