RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 OR10J5Q8NHC4 309 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 APOBEC3DQ96AK3 386 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-205ENST00000439160 SEH1LQ96EE3 360 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 RAB33BQ9H082 229 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 WDR54Q9H977 334 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 PTP4A3O75365 173 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 SCO1O75880 301 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 IFNA1P01562 189 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 TRAPPC2P0DI81 140 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 TRAPPC2BP0DI82 140 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 CLINT1Q14677 625 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 KISS1Q15726 138 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 TSEN54Q7Z6J9 526 aaKnown RBP10.95□□□□□ -0.66
TCOF1-205ENST00000439160 OR10AC1Q8NH08 325 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 ABHD1Q96SE0 405 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 SLC25A31Q9H0C2 315 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 FRRS1LQ9P0K9 344 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 MSTNO14793 375 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 BGLAPP02818 100 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 MAGEA5P43359 124 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 IRF3Q14653 427 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 SFRP5Q5T4F7 317 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 LSRQ86X29 649 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-205ENST00000439160 LGI3Q8N145 548 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 TMEM217Q8N7C4 229 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 OR52N4Q8NGI2 321 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 WDFY2Q96P53 400 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 FBXO4Q9UKT5 387 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 NYNRINQ9P2P1 1898 aaKnown RBP10.94□□□□□ -0.66
TCOF1-205ENST00000439160 SEMG1P04279 462 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 GPM6AP51674 278 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 PXDC1Q5TGL8 231 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 SHEQ5VZ18 495 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 DPPA2Q7Z7J5 298 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 OR2M3Q8NG83 312 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 OR52B4Q8NGK2 314 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 NMNAT2Q9BZQ4 307 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 TINAGL1Q9GZM7 467 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-205ENST00000439160 CCDC86Q9H6F5 360 aaKnown RBP10.94□□□□□ -0.66
TCOF1-205ENST00000439160 GFOD1Q9NXC2 390 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 MEIKINA0A087WXM9 373 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 SPINT2O43291 252 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 ACSM4P0C7M7 580 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 NDUFB7P17568 137 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 THBS4P35443 961 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 LUMP51884 338 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-205ENST00000439160 RHEBQ15382 184 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 CLPPQ16740 277 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF718Q3SXZ3 478 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 DCAF10Q5QP82 559 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 RNLSQ5VYX0 342 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 OR56B2PQ8NGI1 322 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 LIN37Q96GY3 246 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-205ENST00000439160 SLC23A1Q9UHI7 598 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 TRAPPC4Q9Y296 219 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF891A8MT65 544 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-205ENST00000439160 RNF212BA8MTL3 300 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 MASP2O00187 686 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 GLRA1P23415 457 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 FCGR2CP31995 323 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 MC2RQ01718 297 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 C17orf107Q6ZR85 190 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 OSR2Q8N2R0 312 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 HSD17B11Q8NBQ5 300 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 RAB39BQ96DA2 213 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 KCNK15Q9H427 330 aa10.94□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF275Q9NSD4 429 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-205ENST00000439160 A0A1W2PPC1 479 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 TMEM200CA6NKL6 621 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 H7C1Q1 480 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 MED6O75586 246 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 RAB6AP20340 208 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 SOX8P57073 446 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 RNPS1Q15287 305 aaKnown RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 OR2T2Q6IF00 324 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 C20orf196Q8IYI0 205 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 ABHD3Q8WU67 409 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 CTHRC1Q96CG8 243 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 SPTBN1Q01082 2364 aaKnown RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 LYZL6O75951 148 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 GLSO94925 669 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 IFNA4P05014 189 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 OR4E1P0C645 316 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 RPS27AP62979 156 aaKnown RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 UBA52P62987 128 aaKnown RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 RAB31Q13636 194 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF169Q14929 603 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF468Q5VIY5 522 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 OR6K3Q8NGY3 331 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 CNTNAP3BQ96NU0 1288 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF649Q9BS31 505 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 FLVCR1Q9Y5Y0 555 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 ATP23Q9Y6H3 246 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 WDR81Q562E7 1941 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 POLEQ07864 2286 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 C21orf140B9A014 251 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 OGG1O15527 345 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 DHRS3O75911 302 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 GSTP1P09211 210 aaKnown RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 SPINK2P20155 84 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms