RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ACOT8O14734 319 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 ECDO95905 644 aaPredicted RBP15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 LHBP01229 141 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 HMGN1P05114 100 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 CRYBA1P05813 215 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 MUC1P15941 1255 aaPredicted RBP15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 OPRL1P41146 370 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 RPS7P62081 194 aaKnown RBP15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 IL5RAQ01344 420 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 POU4F2Q12837 409 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 PDCD1Q15116 288 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 TEX36Q5VZQ5 186 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 RUSC1-AS1Q66K80 236 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 BTN2A1Q7KYR7 527 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 AQP12AQ8IXF9 295 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 TIGD4Q8IY51 512 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 ZNF454Q8N9F8 522 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 OR1M1Q8NGA1 313 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 CANT1Q8WVQ1 401 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 AMELYQ99218 206 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 YY1AP1Q9H869 796 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 NOX4Q9NPH5 578 aa15.3■□□□□ 0.04
AC004540.1-201ENST00000439120 POM121CA8CG34 1229 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 SRRM5B3KS81 715 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 TNFRSF13BO14836 293 aaPredicted RBP15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 PRODHO43272 600 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 SELENOFO60613 162 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 CSNK2BP67870 215 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 C11orf91Q3C1V1 193 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 PRSS45Q7RTY3 260 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 SLC36A1Q7Z2H8 476 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 WDR86Q86TI4 376 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 SPATA24Q86W54 205 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 OTOSQ8NHW6 89 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 TMIGD2Q96BF3 282 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 RTL8AQ9BWD3 113 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 KAAG1Q9UBP8 84 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 RHBDD3Q9Y3P4 386 aa15.29■□□□□ 0.04
AC004540.1-201ENST00000439120 OSMP13725 252 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 ARF6P62330 175 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 FLOT2Q14254 428 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 WDR82Q6UXN9 313 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 KCTD8Q6ZWB6 473 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 TMEM179BQ7Z7N9 219 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 SCCPDHQ8NBX0 429 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 LHX4Q969G2 390 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 FAM71F1Q96KD3 344 aaPredicted RBP15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 TBX15Q96SF7 602 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 CCL13Q99616 98 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 ABCB9Q9NP78 766 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 ZNF319Q9P2F9 582 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 DNAJB11Q9UBS4 358 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 MPC1Q9Y5U8 109 aa15.28■□□□□ 0.04
AC004540.1-201ENST00000439120 CENPVL3A0A0U1RRI6 287 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 CDIPTO14735 213 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 GYG2O15488 501 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 ANXA8P13928 327 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 MMP9P14780 707 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 OMGP23515 440 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 PRDX4Q13162 271 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 DNAL1Q4LDG9 190 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 WDR38Q5JTN6 314 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 SLC35D3Q5M8T2 416 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 PRR31Q5SQ13 230 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 Q6YL49 198 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 CPOQ8IVL8 374 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 C11orf53Q8IXP5 236 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 GALNT4Q8N4A0 578 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 FAM81AQ8TBF8 368 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 SIRPDQ9H106 197 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 PRDM13Q9H4Q3 707 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 NIPAL2Q9H841 368 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 CNTD2Q9H8S5 307 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 ACOXLQ9NUZ1 547 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 ONECUT1Q9UBC0 465 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 RPUSD1Q9UJJ7 312 aaKnown RBP15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 ZNF391Q9UJN7 358 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 LAMP5Q9UJQ1 280 aa15.27■□□□□ 0.04
AC004540.1-201ENST00000439120 IGHV1-69DA0A0B4J2H0 117 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 FAM181BA6NEQ2 426 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 NKX6-3A6NJ46 265 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 ZNF850A8MQ14 1090 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 NDUFB3O43676 98 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 IGHV1-69P01742 117 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 MDKP21741 143 aaPredicted RBP15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 PSMA6P60900 246 aaKnown RBP15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 GMFBP60983 142 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 CBX1P83916 185 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 IKZF1Q13422 519 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 FIP1L1Q6UN15 594 aaKnown RBP15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 KRT77Q7Z794 578 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 HS3ST5Q8IZT8 346 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 PIGCQ92535 297 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 TAF15Q92804 592 aaKnown RBP eCLIP15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 C12orf43Q96C57 262 aaKnown RBP15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 ITPKCQ96DU7 683 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 HIST1H2AAQ96QV6 131 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 PPP1R3EQ9H7J1 279 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 ZNF696Q9H7X3 374 aa15.26■□□□□ 0.03
AC004540.1-201ENST00000439120 TMEM210A6NLX4 147 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms