RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TGIF1Q15583 401 aa12.24□□□□□ -0.45
PTCHD3-201ENST00000438700 DMRTC1Q5HYR2 192 aa12.24□□□□□ -0.45
PTCHD3-201ENST00000438700 LY6G6FQ5SQ64 297 aa12.24□□□□□ -0.45
PTCHD3-201ENST00000438700 RNF144BQ7Z419 303 aa12.24□□□□□ -0.45
PTCHD3-201ENST00000438700 OR4S1Q8NGB4 309 aa12.24□□□□□ -0.45
PTCHD3-201ENST00000438700 NKX6-2Q9C056 277 aaPredicted RBP12.24□□□□□ -0.45
PTCHD3-201ENST00000438700 HDGFL3Q9Y3E1 203 aa12.24□□□□□ -0.45
PTCHD3-201ENST00000438700 ARPC4-TTLL3A0A0A6YYG9 625 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 IGHV3-15A0A0B4J1V0 119 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 LOC390937A0A1W2PQ73 354 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 ZNF98A6NK75 572 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 LUMP51884 338 aaPredicted RBP12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 C1orf100Q5SVJ3 147 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 JMJD6Q6NYC1 403 aaPredicted RBP12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 ABHD12BQ7Z5M8 362 aaPredicted RBP12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 TMED4Q7Z7H5 227 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 ZNF546Q86UE3 836 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 SLC39A7Q92504 469 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 LRFN3Q9BTN0 628 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 SLC6A15Q9H2J7 730 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 DEPPQ9NTK1 212 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 KLK13Q9UKR3 277 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 RHBDD3Q9Y3P4 386 aa12.23□□□□□ -0.45
PTCHD3-201ENST00000438700 ZNF878C9JN71 531 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 CCSO14618 274 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 CYB5AP00167 134 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 AMY2AP04746 511 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 ABOP16442 354 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 FKBP2P26885 142 aaKnown RBP12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 NBL1P41271 181 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 CLDN17P56750 224 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 TAS2R19P59542 299 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 LYPD6Q86Y78 171 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 ADPRHL1Q8NDY3 354 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 OR1M1Q8NGA1 313 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 SEC22AQ96IW7 307 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 OXGR1Q96P68 337 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 FAM117AQ9C073 453 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 POFUT1Q9H488 388 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 LRRC3CA6NJW4 275 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 ZNF726A6NNF4 738 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 CD37P11049 281 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 ZNF121P58317 390 aaPredicted RBP12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 UNC119Q13432 240 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 NKPD1Q17RQ9 610 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 SCGB2B2Q4G0G5 96 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 PABPC1L2AQ5JQF8 200 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 ABHD17BQ5VST6 288 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 SPINK14Q6IE38 97 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 RTN4RL2Q86UN3 420 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 CHST4Q8NCG5 386 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 TMEM185AQ8NFB2 350 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 OR6X1Q8NH79 312 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 ESRP2Q9H6T0 727 aaKnown RBP12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 LRFN1Q9P244 771 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 ZNF319Q9P2F9 582 aa12.22□□□□□ -0.45
PTCHD3-201ENST00000438700 LOC100509620A0A075B734 347 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 WIPF3A6NGB9 483 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 AQP7P3A6NL99 342 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 F12P00748 615 aaPredicted RBP12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 RFPL3SP0C7P2 107 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 RPA2P15927 270 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 CD96P40200 585 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 GMFBP60983 142 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 ATP1A1-AS1Q5TC04 95 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 SLC25A47Q6Q0C1 308 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 TMPPEQ6ZT21 453 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 CBLN2Q8IUK8 224 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 PAQR4Q8N4S7 273 aaPredicted RBP12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 OR8B12Q8NGG6 310 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 OR5D14Q8NGL3 314 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 FAM71F1Q96KD3 344 aaPredicted RBP12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 USB1Q9BQ65 265 aaKnown RBP12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 RASL12Q9NYN1 266 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 PINLYPA6NC86 204 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 CDRT15L2A8MXV6 281 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 ZNF736B4DX44 427 aaPredicted RBP12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 RAB27BO00194 218 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 DLL1O00548 723 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 ZNF17P17021 662 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 ZNF20P17024 532 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 B2MP61769 119 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 SLC35A1P78382 337 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 AIMP2Q13155 320 aaKnown RBP12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 GUCA2BQ16661 112 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 SLC22A6Q4U2R8 563 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 AWAT2Q6E213 333 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 YRDCQ86U90 279 aaKnown RBP12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 CD163Q86VB7 1156 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 DTX1Q86Y01 620 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 GVQW1Q8N7I0 195 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 PRRX2Q99811 253 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 PIGQQ9BRB3 760 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 PURGQ9UJV8 347 aaKnown RBP12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 SLC5A6Q9Y289 635 aa12.21□□□□□ -0.45
PTCHD3-201ENST00000438700 PTPRBP23467 1997 aa12.21□□□□□ -0.46
PTCHD3-201ENST00000438700 MYO7BQ6PIF6 2116 aa12.21□□□□□ -0.46
PTCHD3-201ENST00000438700 A0A1B0GTI1 187 aa12.2□□□□□ -0.46
PTCHD3-201ENST00000438700 METTL21EPA6NDL7 271 aa12.2□□□□□ -0.46
PTCHD3-201ENST00000438700 RFPL4AA6NLU0 287 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms