RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 OR5V1Q9UGF6 321 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 METRNQ9UJH8 293 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 RHBDD3Q9Y3P4 386 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 hCG_1807616A0A1W2PRN6 198 aa20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 COMMD2Q86X83 199 aa20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 CBR4Q8N4T8 237 aa20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 RFLNBQ8N5W9 214 aa20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 OR8B3Q8NGG8 313 aa20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 HRASLS5Q96KN8 279 aa20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 LYZL4Q96KX0 146 aa20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 OR8B2Q96RD0 313 aa20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 SSBP3Q9BWW4 388 aaPredicted RBP20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 PBOV1Q9GZY1 135 aa20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 C7orf69Q9H7B7 122 aa20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 METTL17Q9H7H0 456 aaPredicted RBP20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 NUFIP1Q9UHK0 495 aaKnown RBP20.71■□□□□ 0.91
RAPGEF1-206ENST00000438647 PRR32B1ATL7 298 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 PHF1O43189 567 aaPredicted RBP20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 CST4P01036 141 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 OR2T7P0C7T2 308 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 ATP6V1B1P15313 513 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 ACKR3P25106 362 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 ATP6V1E1P36543 226 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 MAP2K3P46734 347 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 SEC61A1P61619 476 aaKnown RBP20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 GNB2P62879 340 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 PQLC1Q8N2U9 271 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 GALNT4Q8N4A0 578 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 OR2T27Q8NH04 317 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 TMEM158Q8WZ71 300 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 MDFIQ99750 246 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 RTL8AQ9BWD3 113 aa20.7■□□□□ 0.9
RAPGEF1-206ENST00000438647 FBN1P35555 2871 aaKnown RBP20.69■□□□□ 0.9
RAPGEF1-206ENST00000438647 TRAV38-1A0A0B4J264 116 aa20.69■□□□□ 0.9
RAPGEF1-206ENST00000438647 LGALS8O00214 317 aa20.69■□□□□ 0.9
RAPGEF1-206ENST00000438647 PRDX4Q13162 271 aa20.69■□□□□ 0.9
RAPGEF1-206ENST00000438647 OR1M1Q8NGA1 313 aa20.69■□□□□ 0.9
RAPGEF1-206ENST00000438647 EME1Q96AY2 570 aa20.69■□□□□ 0.9
RAPGEF1-206ENST00000438647 ITPKCQ96DU7 683 aa20.69■□□□□ 0.9
RAPGEF1-206ENST00000438647 RNPEPL1Q9HAU8 725 aa20.69■□□□□ 0.9
RAPGEF1-206ENST00000438647 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.69■□□□□ 0.9
RAPGEF1-206ENST00000438647 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.69■□□□□ 0.9
RAPGEF1-206ENST00000438647 LOC105371242A0A075B767 164 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 ZNF816-ZNF321PA0A0X1KG74 233 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 LOC110117498-PIK3R3F6TDL0 507 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 NDUFA2O43678 99 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 KRT8P05787 483 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 PITPNBP48739 271 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 ZNF154Q13106 437 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 ZIK1Q3SY52 487 aaPredicted RBP20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 LIPNQ5VXI9 398 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 C1orf229Q6ZS94 237 aaPredicted RBP20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 C1QL2Q7Z5L3 287 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 BOLLQ8N9W6 283 aaKnown RBP20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 DEFB108BQ8NET1 73 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 NANPQ8TBE9 248 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 PIGCQ92535 297 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 STMN2Q93045 179 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 HIST1H2AAQ96QV6 131 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 APOL4Q9BPW4 351 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 GTF2A1LQ9UNN4 478 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 R4GMQ9 66 aa20.68■□□□□ 0.9
RAPGEF1-206ENST00000438647 OOEPA6NGQ2 149 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 TMEM210A6NLX4 147 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 ZNF850A8MQ14 1090 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 RNF212BA8MTL3 300 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 MTRF1O75570 445 aaKnown RBP20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 AVPP01185 164 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 BCL2L15Q5TBC7 163 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 MEDAGQ5VYS4 303 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 SFRP4Q6FHJ7 346 aaPredicted RBP20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 ZBTB49Q6ZSB9 765 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 ZNF826PQ6ZT77 177 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 THAP5Q7Z6K1 395 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 ZDHHC23Q8IYP9 409 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 C19orf18Q8NEA5 215 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 SEMA6DQ8NFY4 1073 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 OR10H4Q8NGA5 316 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 OR51E1Q8TCB6 317 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 TBX5Q99593 518 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 GPR84Q9NQS5 396 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 MMP26Q9NRE1 261 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 CLN8Q9UBY8 286 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 SNX5Q9Y5X3 404 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 COL6A5A8TX70 2615 aa20.67■□□□□ 0.9
RAPGEF1-206ENST00000438647 ARHGAP32A7KAX9 2087 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 SNTNA6NMZ2 147 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 C3orf80F5H4A9 247 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 TRAPPC2LH3BP13 241 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 TCF21O43680 179 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 IGLV3-1P01715 115 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 ZNF12P17014 697 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 CD80P33681 288 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 NPY4RP50391 375 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 SNRPGP62308 76 aaKnown RBP20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 MFGE8Q08431 387 aaPredicted RBP20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 RIPPLY1Q0D2K3 151 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 SLC25A30Q5SVS4 291 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 ZBTB37Q5TC79 503 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 KRT74Q7RTS7 529 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms